RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 HUWE1Q7Z6Z7 4374 aaKnown RBP11.71□□□□□ -0.53
SYNE2-228ENST00000639659 SLC16A6O15403 523 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 OR8U8P0C7N1 319 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 FRMD6-AS1P0C7T7 363 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 FHL3Q13643 280 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 ALKBH1Q13686 389 aaKnown RBP11.7□□□□□ -0.54
SYNE2-228ENST00000639659 EBI3Q14213 229 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 RSU1Q15404 277 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 DNAL1Q4LDG9 190 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 AMIGO2Q86SJ2 522 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 Q8N6K4 173 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 SUMF2Q8NBJ7 301 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 OR8J1Q8NGP2 316 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 NEK7Q8TDX7 302 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 RTN4IP1Q8WWV3 396 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-228ENST00000639659 ARL11Q969Q4 196 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 C4orf36Q96KX1 117 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 DPCDQ9BVM2 203 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-228ENST00000639659 ZNF107Q9UII5 783 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-228ENST00000639659 WSB1Q9Y6I7 421 aa11.7□□□□□ -0.54
SYNE2-228ENST00000639659 GABRPO00591 440 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 MAGEB3O15480 346 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 OR7C1O76099 320 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-228ENST00000639659 IGHG4P01861 327 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 INSL3P51460 131 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 F2RL1P55085 397 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 GNB1P62873 340 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 CFHR3Q02985 330 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 ZNF616Q08AN1 781 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 IL13RA2Q14627 380 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 ATP6AP1Q15904 470 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 SRSF7Q16629 238 aaKnown RBP eCLIP11.69□□□□□ -0.54
SYNE2-228ENST00000639659 SLC16A12Q6ZSM3 486 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 RNF152Q8N8N0 203 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 OR10A7Q8NGE5 316 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 OR5D14Q8NGL3 314 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 LINC00574Q9H8X3 128 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 IMPAD1Q9NX62 359 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 DHDHQ9UQ10 334 aa11.69□□□□□ -0.54
SYNE2-228ENST00000639659 SORL1Q92673 2214 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 TMEM30CPA0ZSE6 113 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 OR4C45A6NMZ5 311 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 OVOL1O14753 267 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 SLC31A2O15432 143 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 SPNP16150 400 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 PSMB8P28062 276 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 CD1BP29016 333 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 KCNJ3P48549 501 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 TMED1Q13445 227 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 MMDQ15546 238 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 ATAD3CQ5T2N8 411 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 ASPHD1Q5U4P2 390 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 ADAMTSL5Q6ZMM2 481 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 SERPINA12Q8IW75 414 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 OR10V1Q8NGI7 309 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 DCUN1D4Q92564 292 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 PELI1Q96FA3 418 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 CPNE2Q96FN4 548 aaPredicted RBP11.68□□□□□ -0.54
SYNE2-228ENST00000639659 GABARAPL1Q9H0R8 117 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 KLK15Q9H2R5 256 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 NCOR1P1Q9H4R4 102 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 PARP11Q9NR21 331 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 PLSCR3Q9NRY6 295 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 ING4Q9UNL4 249 aa11.68□□□□□ -0.54
SYNE2-228ENST00000639659 TRIM64CA6NLI5 447 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 G3V318 75 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 CDRT1O95170 752 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 OR5H8P0DN80 308 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 GP9P14770 177 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 RAB3AP20336 220 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 FASP25445 335 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 SOX2P48431 317 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 CCR9P51686 369 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 SLURP1P55000 103 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 ELP2Q6IA86 826 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 FDX2Q6P4F2 183 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 KCTD20Q7Z5Y7 419 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 ZNF429Q86V71 674 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 PRR18Q8N4B5 295 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 FAM71E2Q8N5Q1 922 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 TMEM104Q8NE00 496 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 PXT1Q8NFP0 134 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 OR51A2Q8NGJ7 313 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 ALX4Q9H161 411 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-228ENST00000639659 GFOD1Q9NXC2 390 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 GNG12Q9UBI6 72 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 ST3GAL6Q9Y274 331 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 VSIG4Q9Y279 399 aa11.67□□□□□ -0.54
SYNE2-228ENST00000639659 DNAH7Q8WXX0 4024 aa11.66□□□□□ -0.54
SYNE2-228ENST00000639659 SAC3D1A6NKF1 404 aa11.66□□□□□ -0.54
SYNE2-228ENST00000639659 ATP6V0E1O15342 81 aa11.66□□□□□ -0.54
SYNE2-228ENST00000639659 ATP8B1O43520 1251 aa11.66□□□□□ -0.54
SYNE2-228ENST00000639659 GZMHP20718 246 aa11.66□□□□□ -0.54
SYNE2-228ENST00000639659 SERPINA2P20848 420 aa11.66□□□□□ -0.54
SYNE2-228ENST00000639659 LHFPL3Q86UP9 236 aa11.66□□□□□ -0.54
SYNE2-228ENST00000639659 OR8H1Q8NGG4 311 aa11.66□□□□□ -0.54
SYNE2-228ENST00000639659 PDCD1LG2Q9BQ51 273 aa11.66□□□□□ -0.54
SYNE2-228ENST00000639659 ALG8Q9BVK2 526 aa11.66□□□□□ -0.54
SYNE2-228ENST00000639659 TAS2R4Q9NYW5 299 aa11.66□□□□□ -0.54
SYNE2-228ENST00000639659 C15orf65H3BRN8 121 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms