RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 PSMA1P25786 263 aaKnown RBP11.61□□□□□ -0.55
TUBE1-208ENST00000604743 CALRP27797 417 aaKnown RBP11.61□□□□□ -0.55
TUBE1-208ENST00000604743 HTR2CP28335 458 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 CD34P28906 385 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 GABRA5P31644 462 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 KRTAP10-3P60369 221 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 PAX5Q02548 391 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 EMX1Q04741 257 aaPredicted RBP11.61□□□□□ -0.55
TUBE1-208ENST00000604743 P2RY14Q15391 338 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 NKAPLQ5M9Q1 402 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 C1orf100Q5SVJ3 147 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 OR4C13Q8NGP0 309 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 OR4K15Q8NH41 348 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 OR9G1Q8NH87 305 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 ARL11Q969Q4 196 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 PLGRKTQ9HBL7 147 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 RCC2Q9P258 522 aaKnown RBP11.61□□□□□ -0.55
TUBE1-208ENST00000604743 TRAPPC2LQ9UL33 140 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 PSG11Q9UQ72 335 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 NBEAL1Q6ZS30 2694 aa11.61□□□□□ -0.55
TUBE1-208ENST00000604743 A0A087X0M5 115 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 IGHV3-43A0A0B4J1X8 118 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 A0A1B0GX30 115 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 NPIPB11E5RHQ5 1161 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 ARL6IP5O75915 188 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 IGHV3-43DP0DP04 118 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 GZMHP20718 246 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 CEACAM3P40198 252 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 PROK1P58294 105 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 GABARAPL2P60520 117 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 SSX1Q16384 188 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 TPTE2P1Q5T6R2 138 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 SYT6Q5T7P8 510 aaPredicted RBP11.6□□□□□ -0.55
TUBE1-208ENST00000604743 SIGIRRQ6IA17 410 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 ZNF497Q6ZNH5 498 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 LIAT1Q6ZQX7 453 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 PRR18Q8N4B5 295 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 GFI1Q99684 422 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 NPFFR1Q9GZQ6 430 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 MMP28Q9H239 520 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 PITPNC1Q9UKF7 332 aa11.6□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A10PA6NDY2 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A18PA6NE21 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A16PA6NEW6 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A20PA6NIJ5 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A7PA6NKC0 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A22PA8MWA6 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A12PA8MX19 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A5PA8MXJ8 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A23PA8MXZ1 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 J3QR06 171 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 SDCBPO00560 298 aaPredicted RBP11.59□□□□□ -0.55
TUBE1-208ENST00000604743 SLC22A1O15245 554 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 PDCD6O75340 191 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A15PP0C7V4 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A13PP0C7W8 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A14PP0C7W9 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM90A24PP0C7X0 464 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 BRS3P32247 399 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 DYNLT3P51808 116 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 ARHGDIBP52566 201 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 FAM53AQ6NSI3 398 aaPredicted RBP11.59□□□□□ -0.55
TUBE1-208ENST00000604743 SVOPQ8N4V2 548 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 OR6M1Q8NGM8 313 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 KCNG3Q8TAE7 436 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 RPEQ96AT9 228 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 CREB3L1Q96BA8 519 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 NEDD4LQ96PU5 975 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 NICN1Q9BSH3 213 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 TMEM59Q9BXS4 323 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 LINC00574Q9H8X3 128 aa11.59□□□□□ -0.55
TUBE1-208ENST00000604743 TRRAPQ9Y4A5 3859 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 C15orf65H3BRN8 121 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 ORC5O43913 435 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 BPNT1O95861 308 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 PSMB9P28065 219 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 KIR2DS4P43632 304 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 CLDN12P56749 244 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 RPS27AP62979 156 aaKnown RBP11.58□□□□□ -0.56
TUBE1-208ENST00000604743 UNC119Q13432 240 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 HABP2Q14520 560 aaPredicted RBP11.58□□□□□ -0.56
TUBE1-208ENST00000604743 RAB11BQ15907 218 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 ARSJQ5FYB0 599 aaPredicted RBP11.58□□□□□ -0.56
TUBE1-208ENST00000604743 OR10A7Q8NGE5 316 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 OR10X1Q8NGY0 326 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 OR2T6Q8NHC8 308 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 TOMM40LQ969M1 308 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 CITED1Q99966 193 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 FBLN5Q9UBX5 448 aa11.58□□□□□ -0.56
TUBE1-208ENST00000604743 AMMECR1Q9Y4X0 333 aaPredicted RBP11.58□□□□□ -0.56
TUBE1-208ENST00000604743 TET2Q6N021 2002 aaPredicted RBP11.57□□□□□ -0.56
TUBE1-208ENST00000604743 PKD1L1Q8TDX9 2849 aa11.57□□□□□ -0.56
TUBE1-208ENST00000604743 C12orf77C9JDV5 145 aa11.57□□□□□ -0.56
TUBE1-208ENST00000604743 LY6LH3BQJ8 138 aa11.57□□□□□ -0.56
TUBE1-208ENST00000604743 H3BUI4 141 aa11.57□□□□□ -0.56
TUBE1-208ENST00000604743 SLC17A2O00624 439 aa11.57□□□□□ -0.56
TUBE1-208ENST00000604743 SPINT2O43291 252 aa11.57□□□□□ -0.56
TUBE1-208ENST00000604743 MRPS14O60783 128 aaKnown RBP11.57□□□□□ -0.56
TUBE1-208ENST00000604743 ARSBP15848 533 aa11.57□□□□□ -0.56
TUBE1-208ENST00000604743 RCC1P18754 421 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms