RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 FAM90A5PA8MXJ8 464 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A23PA8MXZ1 464 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 CCRL2O00421 344 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 SLC22A1O15245 554 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A15PP0C7V4 464 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A13PP0C7W8 464 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A14PP0C7W9 464 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FAM90A24PP0C7X0 464 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 JUNBP17275 347 aaPredicted RBP11.25□□□□□ -0.61
CLIP3-205ENST00000592017 MYL9P24844 172 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 HTR1DP28221 377 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 GNG10P50151 68 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 RAB13P51153 203 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 PROK1P58294 105 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 PAX5Q02548 391 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 RAB11BQ15907 218 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 UTF1Q5T230 341 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 UBE2UQ5VVX9 321 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 ZNF773Q6PK81 442 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 RTN4RL2Q86UN3 420 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 FCGR1BQ92637 280 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 LEAP2Q969E1 77 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 CYYR1Q96J86 154 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 GFI1Q99684 422 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 CITED1Q99966 193 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 NCOR1P1Q9H4R4 102 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 TRAPPC2LQ9UL33 140 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 RNF114Q9Y508 228 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 LRRC42Q9Y546 428 aa11.25□□□□□ -0.61
CLIP3-205ENST00000592017 F2RL2O00254 374 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 SLC17A2O00624 439 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 PDCD6O75340 191 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 FUT3P21217 361 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 CLDN12P56749 244 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 UNC119Q13432 240 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 AANATQ16613 207 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 TREML4Q6UXN2 200 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 ZNF497Q6ZNH5 498 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 OR4K15Q8NH41 348 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 KCNG3Q8TAE7 436 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 NICN1Q9BSH3 213 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 C16orf95Q9H693 158 aa11.24□□□□□ -0.61
CLIP3-205ENST00000592017 TSPAN9O75954 239 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 BPNT1O95861 308 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 MT-ND4P03905 459 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 CGB3P0DN86 165 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 CGB7P0DN87 165 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 ARSBP15848 533 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 CD34P28906 385 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 PRRX1P54821 245 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 RPS27AP62979 156 aaKnown RBP11.23□□□□□ -0.61
CLIP3-205ENST00000592017 NEDD8Q15843 81 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 HLA-DRB5Q30154 266 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 SYT6Q5T7P8 510 aaPredicted RBP11.23□□□□□ -0.61
CLIP3-205ENST00000592017 HES5Q5TA89 166 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 SIGIRRQ6IA17 410 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 C22orf42Q6IC83 251 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 TMEM219Q86XT9 240 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 PRR18Q8N4B5 295 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 OR9G1Q8NH87 305 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 PIFOQ8TCI5 191 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 ARL11Q969Q4 196 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 NEDD4LQ96PU5 975 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 DPM3Q9P2X0 92 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 V9GY05 133 aa11.23□□□□□ -0.61
CLIP3-205ENST00000592017 A0A087X0M5 115 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 IGHV3-43A0A0B4J1X8 118 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 A0A1B0GX30 115 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 TRDV1A0A1B0GX56 115 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 VGLL3A8MV65 326 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 TMEM14DPA8MWL7 114 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 LEUTXA8MZ59 168 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 NPIPB11E5RHQ5 1161 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 H3BUI4 141 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 SDCBPO00560 298 aaPredicted RBP11.22□□□□□ -0.61
CLIP3-205ENST00000592017 PDCD5O14737 125 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 WIPF1O43516 503 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 IGLV1-47P01700 117 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 IGHV3-43DP0DP04 118 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 GZMHP20718 246 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 CEACAM3P40198 252 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 OR10A3P58181 314 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 KCTD21Q4G0X4 260 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 CD200R1LQ6Q8B3 271 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 OR51D1Q8NGF3 324 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 MMP28Q9H239 520 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 WNK1Q9H4A3 2382 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 RAB18Q9NP72 206 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 TCF19Q9Y242 345 aa11.22□□□□□ -0.61
CLIP3-205ENST00000592017 AMMECR1Q9Y4X0 333 aaPredicted RBP11.22□□□□□ -0.61
CLIP3-205ENST00000592017 NOTCH1P46531 2555 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 A0A1W2PPE3 182 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 SHISA3A0PJX4 238 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 SMIM30A4D0T7 59 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 C12orf77C9JDV5 145 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 BUB1B-PAK6H3BSN5 160 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 J3QR06 171 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 CHST1O43916 411 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 CHATP28329 748 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 BLVRBP30043 206 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms