RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 UBE2NP61088 152 aaKnown RBP6.32□□□□□ -1.4
ZNF540-206ENST00000589117 MST1LQ2TV78 715 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 FIP1L1Q6UN15 594 aaKnown RBP6.32□□□□□ -1.4
ZNF540-206ENST00000589117 Q6ZRG5 221 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 MOB1BQ7L9L4 216 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-206ENST00000589117 LDLRAD3Q86YD5 345 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 MDS2Q8NDY4 140 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 OR4D5Q8NGN0 318 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 OR1K1Q8NGR3 316 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 OR11L1Q8NGX0 322 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 HPSE2Q8WWQ2 592 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 CYYR1Q96J86 154 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 TP53RKQ96S44 253 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 RTL8AQ9BWD3 113 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 SMDT1Q9H4I9 107 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 TMEM9BQ9NQ34 198 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 TREM2Q9NZC2 230 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 RTTNQ86VV8 2226 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 NGFP01138 241 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 CD5P06127 495 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 SERPINE2P07093 398 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 SFTA3P0C7M3 94 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 SPP1P10451 314 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 MUC1P15941 1255 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-206ENST00000589117 SELEP16581 610 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 RCC1P18754 421 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-206ENST00000589117 CD80P33681 288 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 BAXQ07812 192 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 ZNF616Q08AN1 781 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 ZNF766Q5HY98 468 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 HES3Q5TGS1 186 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 DHRS7BQ6IAN0 325 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-206ENST00000589117 DHRS13Q6UX07 377 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 SUMF2Q8NBJ7 301 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 OR52M1Q8NGK5 317 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 LYPD6BQ8NI32 183 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 GMPPAQ96IJ6 420 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-206ENST00000589117 EIF5A2Q9GZV4 153 aaKnown RBP6.32□□□□□ -1.4
ZNF540-206ENST00000589117 ZNF552Q9H707 407 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-206ENST00000589117 RCL1Q9Y2P8 373 aaKnown RBP6.32□□□□□ -1.4
ZNF540-206ENST00000589117 CNTRLQ7Z7A1 2325 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 FAM74A7A6NL05 159 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 H0Y980 276 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 J3QT63 122 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 CDX4O14627 284 aaPredicted RBP6.31□□□□□ -1.4
ZNF540-206ENST00000589117 HS3ST1O14792 307 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 AGPAT2O15120 278 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 HEXAP06865 529 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 SCTP09683 121 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 OR8U9P0C7N5 309 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 ZNF44P15621 663 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 UCP1P25874 307 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 KCNJ3P48549 501 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 RAB2AP61019 212 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 GUCA2BQ16661 112 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 FAM74A3Q4VXF1 159 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 GAPTQ8N292 157 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 OR5D13Q8NGL4 314 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 BCL2L2Q92843 193 aaPredicted RBP6.31□□□□□ -1.4
ZNF540-206ENST00000589117 ERGIC1Q969X5 290 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 GNPNAT1Q96EK6 184 aaPredicted RBP6.31□□□□□ -1.4
ZNF540-206ENST00000589117 DEFB127Q9H1M4 99 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 TMEM231Q9H6L2 316 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 CDH20Q9HBT6 801 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 IL17BQ9UHF5 180 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 OR2W1Q9Y3N9 320 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 CLEC18AA5D8T8 446 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 NKX2-6A6NCS4 301 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 BTBD17A6NE02 478 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 HSPB6O14558 160 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 H2AFB1P0C5Y9 115 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 ZNF806P0C7X5 589 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 SLC25A6P12236 298 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 EWSR1Q01844 656 aaKnown RBP eCLIP6.31□□□□□ -1.4
ZNF540-206ENST00000589117 PMS2P11Q13670 270 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 OR8G1Q15617 311 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 ZNF818PQ6ZRF7 136 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 FAM219AQ8IW50 185 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 SELENOHQ8IZQ5 122 aaKnown RBP6.31□□□□□ -1.4
ZNF540-206ENST00000589117 BATF2Q8N1L9 274 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 CLEC18CQ8NCF0 446 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 RNASE11Q8TAA1 199 aaKnown RBP6.31□□□□□ -1.4
ZNF540-206ENST00000589117 WDYHV1Q96HA8 205 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 BOD1Q96IK1 185 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 UNKLQ9H9P5 680 aaKnown RBP6.31□□□□□ -1.4
ZNF540-206ENST00000589117 SMCO4Q9NRQ5 59 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 RBM7Q9Y580 266 aaKnown RBP6.31□□□□□ -1.4
ZNF540-206ENST00000589117 NCKAP5O14513 1909 aa6.31□□□□□ -1.4
ZNF540-206ENST00000589117 WDFY3Q8IZQ1 3526 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 A0A1B0GU03 582 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 HSD17B6O14756 317 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 SH2D1BO14796 132 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 SYNGR1O43759 233 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 PITX3O75364 302 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 CNOT4O95628 575 aaKnown RBP6.3□□□□□ -1.4
ZNF540-206ENST00000589117 ADCYAP1P18509 176 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 CA6P23280 308 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 F2RP25116 425 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 SNCAP37840 140 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms