RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 TMEM14DPA8MWL7 114 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 SLC17A2O00624 439 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 CRYBA1P05813 215 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 UBBP0CG47 229 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 PSMB9P28065 219 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 CLDN12P56749 244 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 OR10A3P58181 314 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 RPS27AP62979 156 aaKnown RBP16.22■□□□□ 0.19
SS18-218ENST00000581021 FAM189A2Q15884 450 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 LTC4SQ16873 150 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 FBLN7Q53RD9 439 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 MINOS1Q5TGZ0 78 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 OR52W1Q6IF63 320 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 CCBE1Q6UXH8 406 aaPredicted RBP16.22■□□□□ 0.19
SS18-218ENST00000581021 NDNFQ8TB73 568 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 ZNF747Q9BV97 191 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 SPACA1Q9HBV2 294 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 IDI2-AS1Q9NZ38 188 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 MINOS1-NBL1R4GNA1 71 aa16.22■□□□□ 0.19
SS18-218ENST00000581021 TRDV1A0A1B0GX56 115 aa16.21■□□□□ 0.19
SS18-218ENST00000581021 PDCD6O75340 191 aa16.21■□□□□ 0.19
SS18-218ENST00000581021 BPNT1O95861 308 aa16.21■□□□□ 0.19
SS18-218ENST00000581021 CHATP28329 748 aa16.21■□□□□ 0.19
SS18-218ENST00000581021 SRSF4Q08170 494 aaKnown RBP16.21■□□□□ 0.19
SS18-218ENST00000581021 PLA2G7Q13093 441 aa16.21■□□□□ 0.19
SS18-218ENST00000581021 HLA-DRB5Q30154 266 aa16.21■□□□□ 0.19
SS18-218ENST00000581021 DHRS7BQ6IAN0 325 aaPredicted RBP16.21■□□□□ 0.19
SS18-218ENST00000581021 OR4F5Q8NH21 305 aa16.21■□□□□ 0.19
SS18-218ENST00000581021 LINC01006Q8NI28 216 aa16.21■□□□□ 0.19
SS18-218ENST00000581021 TM2D1Q9BX74 207 aa16.21■□□□□ 0.19
SS18-218ENST00000581021 TMEM59Q9BXS4 323 aa16.21■□□□□ 0.19
SS18-218ENST00000581021 ETAA1Q9NY74 926 aa16.21■□□□□ 0.19
SS18-218ENST00000581021 UBE2QL1A1L167 161 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 MCRIP1C9JLW8 97 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 LY6LH3BQJ8 138 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 HAX1O00165 279 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 AIPO00170 330 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 CCRL2O00421 344 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 FUT3P21217 361 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 HTR1DP28221 377 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 KRTAP10-3P60369 221 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 KCTD21Q4G0X4 260 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 Q6ZPA2 131 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 C5orf24Q7Z6I8 188 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 NR2C2APQ86WQ0 139 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 OR4K15Q8NH41 348 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 WFDC12Q8WWY7 111 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 SULT4A1Q9BR01 284 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 LPAR5Q9H1C0 372 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 PLGRKTQ9HBL7 147 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 TCF19Q9Y242 345 aa16.2■□□□□ 0.18
SS18-218ENST00000581021 A6NDX4 124 aa16.19■□□□□ 0.18
SS18-218ENST00000581021 C12orf77C9JDV5 145 aa16.19■□□□□ 0.18
SS18-218ENST00000581021 RCC1P18754 421 aaPredicted RBP16.19■□□□□ 0.18
SS18-218ENST00000581021 RAB11BQ15907 218 aa16.19■□□□□ 0.18
SS18-218ENST00000581021 NKAPLQ5M9Q1 402 aa16.19■□□□□ 0.18
SS18-218ENST00000581021 C22orf42Q6IC83 251 aa16.19■□□□□ 0.18
SS18-218ENST00000581021 TMEM219Q86XT9 240 aa16.19■□□□□ 0.18
SS18-218ENST00000581021 KCNG3Q8TAE7 436 aa16.19■□□□□ 0.18
SS18-218ENST00000581021 ZNF596Q8TC21 504 aa16.19■□□□□ 0.18
SS18-218ENST00000581021 MRPL30Q8TCC3 161 aaKnown RBP16.19■□□□□ 0.18
SS18-218ENST00000581021 FCGR1BQ92637 280 aa16.19■□□□□ 0.18
SS18-218ENST00000581021 DPM3Q9P2X0 92 aa16.19■□□□□ 0.18
SS18-218ENST00000581021 PSG11Q9UQ72 335 aa16.19■□□□□ 0.18
SS18-218ENST00000581021 TRRAPQ9Y4A5 3859 aa16.19■□□□□ 0.18
SS18-218ENST00000581021 TRAV1-2A0A0B4J238 106 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 CLPSL1A2RUU4 121 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 FOXI3A8MTJ6 420 aaPredicted RBP16.18■□□□□ 0.18
SS18-218ENST00000581021 BUB1B-PAK6H3BSN5 160 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 LDLRAD4O15165 306 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 TSPAN9O75954 239 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 GNG10P50151 68 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 DYNLT3P51808 116 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 LOXL3P58215 753 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 RBM39Q14498 530 aaKnown RBP16.18■□□□□ 0.18
SS18-218ENST00000581021 TPTE2P1Q5T6R2 138 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 SYT6Q5T7P8 510 aaPredicted RBP16.18■□□□□ 0.18
SS18-218ENST00000581021 HES5Q5TA89 166 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 OLFML2AQ68BL7 652 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 C6orf201Q7Z4U5 140 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 OR51D1Q8NGF3 324 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 OR9G1Q8NH87 305 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 ARL11Q969Q4 196 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 MMP28Q9H239 520 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 BEX1Q9HBH7 125 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 SIGLEC9Q9Y336 463 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 V9GY05 133 aa16.18■□□□□ 0.18
SS18-218ENST00000581021 A0A1W2PPE3 182 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 POM121CA8CG34 1229 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 J3QR06 171 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 TOR1AO14656 332 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 GLAP06280 429 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 ARSBP15848 533 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 CD24P25063 80 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 PROK1P58294 105 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 DIAPH2-AS1Q14236 149 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 OR2W3Q7Z3T1 314 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 OR10A7Q8NGE5 316 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 OR1L1Q8NH94 360 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 FAM3DQ96BQ1 224 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms