RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 TMEM59Q9BXS4 323 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 KCNK15Q9H427 330 aa11.69□□□□□ -0.54
MKS1-207ENST00000578789 AK6Q9Y3D8 172 aaKnown RBP11.69□□□□□ -0.54
MKS1-207ENST00000578789 TRAV1-2A0A0B4J238 106 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 A0A1B0GUS0 222 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 FAM172BPA6NC97 362 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 C15orf65H3BRN8 121 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 AIPO00170 330 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 CA11O75493 328 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 MT-ND4P03905 459 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 MDKP21741 143 aaPredicted RBP11.68□□□□□ -0.54
MKS1-207ENST00000578789 PAX6P26367 422 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 HTR1DP28221 377 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 SSTR5P35346 364 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 RAB11BQ15907 218 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 HLA-DRB5Q30154 266 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 DHRS7BQ6IAN0 325 aaPredicted RBP11.68□□□□□ -0.54
MKS1-207ENST00000578789 OR10K2Q6IF99 312 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 LIAT1Q6ZQX7 453 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 C3orf56Q8N813 242 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 NEK7Q8TDX7 302 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 PLGRKTQ9HBL7 147 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 ETAA1Q9NY74 926 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 FBLN5Q9UBX5 448 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 PEX16Q9Y5Y5 336 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 V9GY05 133 aa11.68□□□□□ -0.54
MKS1-207ENST00000578789 TRAV39A0A0B4J263 110 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 SHISA3A0PJX4 238 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 POM121CA8CG34 1229 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 PDCD5O14737 125 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 ORC5O43913 435 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 GZMHP20718 246 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 MYL9P24844 172 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 CHATP28329 748 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 RANBP1P43487 201 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 PSMD7P51665 324 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 P2RY14Q15391 338 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 SSX2Q16385 188 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 UTF1Q5T230 341 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 SYT6Q5T7P8 510 aaPredicted RBP11.67□□□□□ -0.54
MKS1-207ENST00000578789 SLC16A12Q6ZSM3 486 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 OR9G1Q8NH87 305 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 NDNFQ8TB73 568 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 ZNF747Q9BV97 191 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 DPM3Q9P2X0 92 aa11.67□□□□□ -0.54
MKS1-207ENST00000578789 ARSBP15848 533 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 NFYBP25208 207 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 FGF9P31371 208 aaPredicted RBP11.66□□□□□ -0.54
MKS1-207ENST00000578789 PRRX1P54821 245 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 FAM189A2Q15884 450 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 C6orf183Q5T699 404 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 Q6ZSV7 163 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 OR52M1Q8NGK5 317 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 RFESDQ8TAC1 157 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 CREB3L1Q96BA8 519 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 CYYR1Q96J86 154 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 NICN1Q9BSH3 213 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 LPAR5Q9H1C0 372 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 MMP28Q9H239 520 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 BEX1Q9HBH7 125 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 RAB18Q9NP72 206 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 STUB1Q9UNE7 303 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 TCF19Q9Y242 345 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 HILPDAQ9Y5L2 63 aa11.66□□□□□ -0.54
MKS1-207ENST00000578789 A0A0A6YYD4 124 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 CLPSL1A2RUU4 121 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 LEUTXA8MZ59 168 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 OOSP1A8MZH6 123 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 LY6LH3BQJ8 138 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 BUB1B-PAK6H3BSN5 160 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 F2RL2O00254 374 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 TOR1AO14656 332 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 LDLRAD4O15165 306 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 TSPAN9O75954 239 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 LY6EQ16553 131 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 TMEM30BQ3MIR4 351 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 PLA1AQ53H76 456 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 NKAPLQ5M9Q1 402 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 OLFML2AQ68BL7 652 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 C22orf42Q6IC83 251 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 TRAT1Q6PIZ9 186 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 FAM89BQ8N5H3 189 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 OR4K15Q8NH41 348 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 MRPL30Q8TCC3 161 aaKnown RBP11.65□□□□□ -0.54
MKS1-207ENST00000578789 CCDC107Q8WV48 283 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 ARL11Q969Q4 196 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 NEDD4LQ96PU5 975 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 SULT4A1Q9BR01 284 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 URM1Q9BTM9 101 aaKnown RBP11.65□□□□□ -0.54
MKS1-207ENST00000578789 C16orf95Q9H693 158 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 RAB9BQ9NP90 201 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 ABCB10Q9NRK6 738 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 MBNL3Q9NUK0 354 aaKnown RBP11.65□□□□□ -0.54
MKS1-207ENST00000578789 TXNL4BQ9NX01 149 aaKnown RBP11.65□□□□□ -0.54
MKS1-207ENST00000578789 STEAP1Q9UHE8 339 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 TRAPPC2LQ9UL33 140 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 PSG11Q9UQ72 335 aa11.65□□□□□ -0.54
MKS1-207ENST00000578789 UBE2QL1A1L167 161 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 A6NDX4 124 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 FOXI3A8MTJ6 420 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms