RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 BRICD5Q6PL45 260 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 NDNFQ8TB73 568 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 MRGPRDQ8TDS7 321 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 NEK7Q8TDX7 302 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 TAF15Q92804 592 aaKnown RBP eCLIP12.47□□□□□ -0.41
COMMD4-212ENST00000565517 FAM46BQ96A09 425 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 GFI1Q99684 422 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 TM2D1Q9BX74 207 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 ZNF286AQ9HBT8 521 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 RAB18Q9NP72 206 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 DPM3Q9P2X0 92 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 AK6Q9Y3D8 172 aaKnown RBP12.47□□□□□ -0.41
COMMD4-212ENST00000565517 PEX16Q9Y5Y5 336 aa12.47□□□□□ -0.41
COMMD4-212ENST00000565517 CLPSL1A2RUU4 121 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 TMEM14DPA8MWL7 114 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 HAX1O00165 279 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 TOR1AO14656 332 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 TSPAN9O75954 239 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 PAX6P26367 422 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 RPS27AP62979 156 aaKnown RBP12.46□□□□□ -0.41
COMMD4-212ENST00000565517 QRFPP83859 136 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 FAM189A2Q15884 450 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 HLA-DRB5Q30154 266 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 ZNF773Q6PK81 442 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 SHISA2Q6UWI4 295 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 OR2W3Q7Z3T1 314 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 OR52M1Q8NGK5 317 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 OR9G1Q8NH87 305 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 TMEM59Q9BXS4 323 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 C16orf95Q9H693 158 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 PLGRKTQ9HBL7 147 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 ABCB10Q9NRK6 738 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 ETAA1Q9NY74 926 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 V9GY05 133 aa12.46□□□□□ -0.41
COMMD4-212ENST00000565517 LEUTXA8MZ59 168 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 C15orf65H3BRN8 121 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 BUB1B-PAK6H3BSN5 160 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 AIPO00170 330 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 PDCD5O14737 125 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 ARSBP15848 533 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 NFYBP25208 207 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 CEACAM3P40198 252 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 UNC119Q13432 240 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 KCTD21Q4G0X4 260 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 OLFML2AQ68BL7 652 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 OR10K2Q6IF99 312 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 Q6ZSV7 163 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 DTX3Q8N9I9 347 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 RFESDQ8TAC1 157 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 RAB9BQ9NP90 201 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 PITPNC1Q9UKF7 332 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 HILPDAQ9Y5L2 63 aa12.45□□□□□ -0.42
COMMD4-212ENST00000565517 TRAV39A0A0B4J263 110 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 FAM172BPA6NC97 362 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 OOSP1A8MZH6 123 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 LY6LH3BQJ8 138 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 J3QR06 171 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 PSMB9P28065 219 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 CHATP28329 748 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 FGF9P31371 208 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-212ENST00000565517 SSTR5P35346 364 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 ARHGDIBP52566 201 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 RAB11BQ15907 218 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 LY6EQ16553 131 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 TMEM30BQ3MIR4 351 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 C6orf183Q5T699 404 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 SYT6Q5T7P8 510 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-212ENST00000565517 TRAT1Q6PIZ9 186 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 ZNF554Q86TJ5 538 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 LINC01006Q8NI28 216 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 CCDC107Q8WV48 283 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 ARL11Q969Q4 196 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 NEDD4LQ96PU5 975 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 URM1Q9BTM9 101 aaKnown RBP12.44□□□□□ -0.42
COMMD4-212ENST00000565517 MMP28Q9H239 520 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 FBLN5Q9UBX5 448 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 TRAPPC2LQ9UL33 140 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 TCF19Q9Y242 345 aa12.44□□□□□ -0.42
COMMD4-212ENST00000565517 UBE2QL1A1L167 161 aa12.43□□□□□ -0.42
COMMD4-212ENST00000565517 A6NDX4 124 aa12.43□□□□□ -0.42
COMMD4-212ENST00000565517 F2RL2O00254 374 aa12.43□□□□□ -0.42
COMMD4-212ENST00000565517 MYL9P24844 172 aa12.43□□□□□ -0.42
COMMD4-212ENST00000565517 RAB13P51153 203 aa12.43□□□□□ -0.42
COMMD4-212ENST00000565517 Q3ZCU0 254 aa12.43□□□□□ -0.42
COMMD4-212ENST00000565517 PLA1AQ53H76 456 aa12.43□□□□□ -0.42
COMMD4-212ENST00000565517 UTF1Q5T230 341 aa12.43□□□□□ -0.42
COMMD4-212ENST00000565517 FAM89BQ8N5H3 189 aa12.43□□□□□ -0.42
COMMD4-212ENST00000565517 RANBP3Q9H6Z4 567 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-212ENST00000565517 MBNL3Q9NUK0 354 aaKnown RBP12.43□□□□□ -0.42
COMMD4-212ENST00000565517 PSG11Q9UQ72 335 aa12.43□□□□□ -0.42
COMMD4-212ENST00000565517 AMMECR1Q9Y4X0 333 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-212ENST00000565517 RNF114Q9Y508 228 aa12.43□□□□□ -0.42
COMMD4-212ENST00000565517 SPINT2O43291 252 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 BLVRBP30043 206 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-212ENST00000565517 BRS3P32247 399 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 KIR2DS4P43632 304 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 LOXL3P58215 753 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 P2RY14Q15391 338 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 C2orf76Q3KRA6 126 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 TPTE2P1Q5T6R2 138 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms