RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 WFDC12Q8WWY7 111 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 KCTD12Q96CX2 325 aaKnown RBP12.78□□□□□ -0.36
USB1-208ENST00000563207 ZNF714Q96N38 554 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 SIRT7Q9NRC8 400 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 TAS2R3Q9NYW6 316 aa12.78□□□□□ -0.36
USB1-208ENST00000563207 TMEM30CPA0ZSE6 113 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 SMIM30A4D0T7 59 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 HSPB6O14558 160 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 NOL3O60936 208 aaKnown RBP12.77□□□□□ -0.37
USB1-208ENST00000563207 ZNF728P0DKX0 622 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 CHATP28329 748 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 BLVRBP30043 206 aaPredicted RBP12.77□□□□□ -0.37
USB1-208ENST00000563207 TGFBR1P36897 503 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 GLIPR1P48060 266 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 DYNC1I2Q13409 638 aaKnown RBP12.77□□□□□ -0.37
USB1-208ENST00000563207 IDNKQ5T6J7 187 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 RSBN1Q5VWQ0 802 aaPredicted RBP12.77□□□□□ -0.37
USB1-208ENST00000563207 NEK7Q8TDX7 302 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 COQ2Q96H96 371 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 NAA50Q9GZZ1 169 aaKnown RBP12.77□□□□□ -0.37
USB1-208ENST00000563207 GAL3ST2Q9H3Q3 398 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 KCNK15Q9H427 330 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 PLEKHJ1Q9NW61 149 aa12.77□□□□□ -0.37
USB1-208ENST00000563207 C17orf98A8MV24 154 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 RNASEK-C17orf49H0YIS7 233 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 GPR137BO60478 399 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 IER3P46695 156 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 VEGFCP49767 419 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 RORCP51449 518 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 ZNF273Q14593 569 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 ARL6IP1Q15041 203 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 NCR3LG1Q68D85 454 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 ZNF497Q6ZNH5 498 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 GAPTQ8N292 157 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 NICN1Q9BSH3 213 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 DCSTAMPQ9H295 470 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 RIMS4Q9H426 269 aaPredicted RBP12.76□□□□□ -0.37
USB1-208ENST00000563207 ETAA1Q9NY74 926 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 ZNF581Q9P0T4 197 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 SPATA2Q9UM82 520 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 MMP24Q9Y5R2 645 aa12.76□□□□□ -0.37
USB1-208ENST00000563207 MEIKINA0A087WXM9 373 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 A0A0A6YYD4 124 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 A0A0B4J203 849 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 ZNF729A6NN14 1252 aaPredicted RBP12.75□□□□□ -0.37
USB1-208ENST00000563207 FOXI3A8MTJ6 420 aaPredicted RBP12.75□□□□□ -0.37
USB1-208ENST00000563207 GZMHP20718 246 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 DLX6P56179 175 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 ERVFRD-1P60508 538 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 GUCA2AQ02747 115 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 TRAT1Q6PIZ9 186 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 Q6ZTK2 550 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 TRAPPC6BQ86SZ2 158 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 TPRX1Q8N7U7 411 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 PLPPR1Q8TBJ4 325 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 LGALS14Q8TCE9 139 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 C17orf50Q8WW18 174 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 ACOT12Q8WYK0 555 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 HEXA-AS1Q9H8Q6 139 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 RAB9BQ9NP90 201 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 KIF25Q9UIL4 384 aa12.75□□□□□ -0.37
USB1-208ENST00000563207 A0A0A6YYH2 397 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 A6NJ64 397 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 SOCS1O15524 211 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 MT-ND4P03905 459 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 CRYBA1P05813 215 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 CGB3P0DN86 165 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 CGB7P0DN87 165 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 SNRPBP14678 240 aaKnown RBP12.74□□□□□ -0.37
USB1-208ENST00000563207 PAX6P26367 422 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 EFNB2P52799 333 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 TMEM50BP56557 158 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 NKAPLQ5M9Q1 402 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 OLFML2AQ68BL7 652 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 HIST2H2BDQ6DRA6 164 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 BRICD5Q6PL45 260 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 HEPN1Q6WQI6 88 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 TCF23Q7RTU1 214 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 C6orf201Q7Z4U5 140 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 ZNF554Q86TJ5 538 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 C11orf42Q8N5U0 333 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 OR10R2Q8NGX6 335 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 OR4F5Q8NH21 305 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 LINC01006Q8NI28 216 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 SSMEM1Q8WWF3 244 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 AP3S1Q92572 193 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 TNFRSF14Q92956 283 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 CMTM3Q96MX0 182 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 ATG5Q9H1Y0 275 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 LINC00574Q9H8X3 128 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 BEX1Q9HBH7 125 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 POMT1Q9Y6A1 747 aa12.74□□□□□ -0.37
USB1-208ENST00000563207 KBTBD11-OT1A0A1B0GTJ5 212 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 UBE2QL1A1L167 161 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 CLPSL1A2RUU4 121 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 ZNF701M0R085 212 aaPredicted RBP12.73□□□□□ -0.37
USB1-208ENST00000563207 RAB27BO00194 218 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 NDUFA7O95182 113 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 PAHP00439 452 aa12.73□□□□□ -0.37
USB1-208ENST00000563207 CCL3L1P16619 93 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms