RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SPICQ8N5J4 248 aa2.55□□□□□ -2
HERC1-215ENST00000561436 FAM71E2Q8N5Q1 922 aa2.55□□□□□ -2
HERC1-215ENST00000561436 Q8N7P7 452 aa2.55□□□□□ -2
HERC1-215ENST00000561436 ZIC4Q8N9L1 334 aa2.55□□□□□ -2
HERC1-215ENST00000561436 GATSQ8NAP1 163 aa2.55□□□□□ -2
HERC1-215ENST00000561436 C20orf203Q8NBC4 194 aa2.55□□□□□ -2
HERC1-215ENST00000561436 ATP6V1C2Q8NEY4 427 aa2.55□□□□□ -2
HERC1-215ENST00000561436 OR52E4Q8NGH9 312 aa2.55□□□□□ -2
HERC1-215ENST00000561436 OR1L6Q8NGR2 347 aa2.55□□□□□ -2
HERC1-215ENST00000561436 OR2G2Q8NGZ5 317 aa2.55□□□□□ -2
HERC1-215ENST00000561436 MFSD8Q8NHS3 518 aa2.55□□□□□ -2
HERC1-215ENST00000561436 C11orf40Q8WZ69 217 aa2.55□□□□□ -2
HERC1-215ENST00000561436 CDS1Q92903 461 aa2.55□□□□□ -2
HERC1-215ENST00000561436 TMIGD2Q96BF3 282 aa2.55□□□□□ -2
HERC1-215ENST00000561436 AURKBQ96GD4 344 aaPredicted RBP2.55□□□□□ -2
HERC1-215ENST00000561436 CYYR1Q96J86 154 aa2.55□□□□□ -2
HERC1-215ENST00000561436 PPP3R2Q96LZ3 170 aa2.55□□□□□ -2
HERC1-215ENST00000561436 TRNT1Q96Q11 434 aaKnown RBP2.55□□□□□ -2
HERC1-215ENST00000561436 SH3GL1Q99961 368 aa2.55□□□□□ -2
HERC1-215ENST00000561436 C1QTNF6Q9BXI9 259 aa2.55□□□□□ -2
HERC1-215ENST00000561436 BCL2L14Q9BZR8 327 aa2.55□□□□□ -2
HERC1-215ENST00000561436 SLC19A3Q9BZV2 496 aa2.55□□□□□ -2
HERC1-215ENST00000561436 CTPS2Q9NRF8 586 aa2.55□□□□□ -2
HERC1-215ENST00000561436 ANAPC11Q9NYG5 84 aa2.55□□□□□ -2
HERC1-215ENST00000561436 CALYQ9NYX4 217 aa2.55□□□□□ -2
HERC1-215ENST00000561436 CALML5Q9NZT1 146 aa2.55□□□□□ -2
HERC1-215ENST00000561436 OPN4Q9UHM6 478 aa2.55□□□□□ -2
HERC1-215ENST00000561436 PIKFYVEQ9Y2I7 2098 aa2.55□□□□□ -2
HERC1-215ENST00000561436 ANK2Q01484 3957 aa2.55□□□□□ -2
HERC1-215ENST00000561436 CPAMD8Q8IZJ3 1885 aa2.54□□□□□ -2
HERC1-215ENST00000561436 NSD1Q96L73 2696 aaPredicted RBP2.54□□□□□ -2
HERC1-215ENST00000561436 COL6A5A8TX70 2615 aa2.54□□□□□ -2
HERC1-215ENST00000561436 TMED7-TICAM2A0A0A6YYA0 188 aa2.54□□□□□ -2
HERC1-215ENST00000561436 IGHV3-15A0A0B4J1V0 119 aa2.54□□□□□ -2
HERC1-215ENST00000561436 SMCO3A2RU48 225 aa2.54□□□□□ -2
HERC1-215ENST00000561436 GMNCA6NCL1 334 aa2.54□□□□□ -2
HERC1-215ENST00000561436 C12orf77C9JDV5 145 aa2.54□□□□□ -2
HERC1-215ENST00000561436 GOSR2O14653 212 aa2.54□□□□□ -2
HERC1-215ENST00000561436 SLC31A2O15432 143 aa2.54□□□□□ -2
HERC1-215ENST00000561436 SHOX2O60902 331 aaPredicted RBP2.54□□□□□ -2
HERC1-215ENST00000561436 NPIPB7O75200 414 aa2.54□□□□□ -2
HERC1-215ENST00000561436 FARS2O95363 451 aaKnown RBP2.54□□□□□ -2
HERC1-215ENST00000561436 RAB36O95755 333 aa2.54□□□□□ -2
HERC1-215ENST00000561436 ALDOBP05062 364 aa2.54□□□□□ -2
HERC1-215ENST00000561436 SERPINA5P05154 406 aa2.54□□□□□ -2
HERC1-215ENST00000561436 DBIP07108 87 aaKnown RBP2.54□□□□□ -2
HERC1-215ENST00000561436 UBTFL6P0CB48 400 aaPredicted RBP2.54□□□□□ -2
HERC1-215ENST00000561436 CHTF8P0CG12 524 aa2.54□□□□□ -2
HERC1-215ENST00000561436 NR2C1P13056 603 aa2.54□□□□□ -2
HERC1-215ENST00000561436 ZNF14P17017 642 aaPredicted RBP2.54□□□□□ -2
HERC1-215ENST00000561436 ZNF43P17038 809 aa2.54□□□□□ -2
HERC1-215ENST00000561436 CXCR1P25024 350 aa2.54□□□□□ -2
HERC1-215ENST00000561436 COL8A2P25067 703 aa2.54□□□□□ -2
HERC1-215ENST00000561436 TAGLN2P37802 199 aaKnown RBP2.54□□□□□ -2
HERC1-215ENST00000561436 IDH2P48735 452 aaKnown RBP2.54□□□□□ -2
HERC1-215ENST00000561436 SUB1P53999 127 aaKnown RBP eCLIP2.54□□□□□ -2
HERC1-215ENST00000561436 PLTPP55058 493 aa2.54□□□□□ -2
HERC1-215ENST00000561436 PLP1P60201 277 aa2.54□□□□□ -2
HERC1-215ENST00000561436 HPCAP84074 193 aa2.54□□□□□ -2
HERC1-215ENST00000561436 GK3PQ14409 553 aa2.54□□□□□ -2
HERC1-215ENST00000561436 SLC9A3R2Q15599 337 aa2.54□□□□□ -2
HERC1-215ENST00000561436 MPPED2Q15777 294 aa2.54□□□□□ -2
HERC1-215ENST00000561436 TAF9Q16594 264 aa2.54□□□□□ -2
HERC1-215ENST00000561436 HIKESHIQ53FT3 197 aa2.54□□□□□ -2
HERC1-215ENST00000561436 VAX1Q5SQQ9 334 aa2.54□□□□□ -2
HERC1-215ENST00000561436 CCNJQ5T5M9 372 aa2.54□□□□□ -2
HERC1-215ENST00000561436 ARL9Q6T311 187 aa2.54□□□□□ -2
HERC1-215ENST00000561436 ZYG11AQ6WRX3 759 aa2.54□□□□□ -2
HERC1-215ENST00000561436 HDDC2Q7Z4H3 204 aa2.54□□□□□ -2
HERC1-215ENST00000561436 SLC35F6Q8N357 371 aa2.54□□□□□ -2
HERC1-215ENST00000561436 TRIML2Q8N7C3 387 aa2.54□□□□□ -2
HERC1-215ENST00000561436 SIGLECL1Q8N7X8 197 aa2.54□□□□□ -2
HERC1-215ENST00000561436 SPERTQ8NA61 448 aa2.54□□□□□ -2
HERC1-215ENST00000561436 SUMF2Q8NBJ7 301 aa2.54□□□□□ -2
HERC1-215ENST00000561436 OR56B2PQ8NGI1 322 aa2.54□□□□□ -2
HERC1-215ENST00000561436 RPUSD4Q96CM3 377 aaKnown RBP2.54□□□□□ -2
HERC1-215ENST00000561436 TSSK3Q96PN8 268 aa2.54□□□□□ -2
HERC1-215ENST00000561436 EBPLQ9BY08 206 aa2.54□□□□□ -2
HERC1-215ENST00000561436 MRPL37Q9BZE1 423 aaKnown RBP2.54□□□□□ -2
HERC1-215ENST00000561436 C16orf95Q9H693 158 aa2.54□□□□□ -2
HERC1-215ENST00000561436 CACYBPQ9HB71 228 aaKnown RBP2.54□□□□□ -2
HERC1-215ENST00000561436 NOX3Q9HBY0 568 aa2.54□□□□□ -2
HERC1-215ENST00000561436 CRLF2Q9HC73 371 aa2.54□□□□□ -2
HERC1-215ENST00000561436 INSIG2Q9Y5U4 225 aa2.54□□□□□ -2
HERC1-215ENST00000561436 PCLOQ9Y6V0 5065 aa2.54□□□□□ -2
HERC1-215ENST00000561436 TACC2O95359 2948 aa2.54□□□□□ -2
HERC1-215ENST00000561436 RAI1Q7Z5J4 1906 aaPredicted RBP2.54□□□□□ -2
HERC1-215ENST00000561436 MYO7BQ6PIF6 2116 aa2.53□□□□□ -2
HERC1-215ENST00000561436 UBR4Q5T4S7 5183 aa2.53□□□□□ -2
HERC1-215ENST00000561436 A0A0B4J2A0 478 aa2.53□□□□□ -2
HERC1-215ENST00000561436 KIR2DS1A0A191URI9 304 aa2.53□□□□□ -2
HERC1-215ENST00000561436 A0A1W2PPE3 182 aa2.53□□□□□ -2
HERC1-215ENST00000561436 C9JVG2 144 aa2.53□□□□□ -2
HERC1-215ENST00000561436 AIM2O14862 343 aa2.53□□□□□ -2
HERC1-215ENST00000561436 PIN1P1O15428 100 aa2.53□□□□□ -2
HERC1-215ENST00000561436 UPK3AO75631 287 aa2.53□□□□□ -2
HERC1-215ENST00000561436 AHSA1O95433 338 aa2.53□□□□□ -2
HERC1-215ENST00000561436 DUX4L4P0CJ87 422 aa2.53□□□□□ -2
HERC1-215ENST00000561436 OR8G3PP0DMU2 310 aa2.53□□□□□ -2
HERC1-215ENST00000561436 MYL2P10916 166 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms