RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 PDCD5O14737 125 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 TIMM23O14925 209 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 PIN1P1O15428 100 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 ORC5O43913 435 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 SC5DO75845 299 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 TSPAN9O75954 239 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 MPIG6BO95866 241 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 IL1AP01583 271 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 GLAP06280 429 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 LPLP06858 475 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 UCHL1P09936 223 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 FUT3P21217 361 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 GALP22466 123 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 MYL9P24844 172 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 IL3RAP26951 378 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 CALRP27797 417 aaKnown RBP3.54□□□□□ -1.84
SNX1-205ENST00000559339 CD34P28906 385 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 SSTR5P35346 364 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 RAB13P51153 203 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 DYNLT3P51808 116 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 MRPS15P82914 257 aaKnown RBP3.54□□□□□ -1.84
SNX1-205ENST00000559339 EMX1Q04741 257 aaPredicted RBP3.54□□□□□ -1.84
SNX1-205ENST00000559339 MADCAM1Q13477 382 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 INSL4Q14641 139 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 IRF3Q14653 427 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 LY6EQ16553 131 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 LTC4SQ16873 150 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 C17orf58Q2M2W7 97 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 HLA-DRB5Q30154 266 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 TMEM30BQ3MIR4 351 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 PLA1AQ53H76 456 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 NKAPLQ5M9Q1 402 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 C6orf183Q5T699 404 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 FAM27D1Q5T7N8 215 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 SYT6Q5T7P8 510 aaPredicted RBP3.54□□□□□ -1.84
SNX1-205ENST00000559339 RSBN1Q5VWQ0 802 aaPredicted RBP3.54□□□□□ -1.84
SNX1-205ENST00000559339 UNQ9370/PRO34162Q6UXP9 181 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 Q6ZTK2 550 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 PRR18Q8N4B5 295 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 OR4P4Q8NGL7 312 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 OR6M1Q8NGM8 313 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 OR13A1Q8NGR1 328 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 OR10X1Q8NGY0 326 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 LINC01006Q8NI28 216 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 RFESDQ8TAC1 157 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 SGCDQ92629 289 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 ARL11Q969Q4 196 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 GALMQ96C23 342 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 AJUBAQ96IF1 538 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 KIRREL1Q96J84 757 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 Q96M66 194 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 URM1Q9BTM9 101 aaKnown RBP3.54□□□□□ -1.84
SNX1-205ENST00000559339 TMEM59Q9BXS4 323 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 MMP28Q9H239 520 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 PPIL3Q9H2H8 161 aaKnown RBP3.54□□□□□ -1.84
SNX1-205ENST00000559339 BANF2Q9H503 90 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 C16orf95Q9H693 158 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 RANBP3Q9H6Z4 567 aaPredicted RBP3.54□□□□□ -1.84
SNX1-205ENST00000559339 LINC00574Q9H8X3 128 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 PLEKHJ1Q9NW61 149 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 CALYQ9NYX4 217 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 IDI2-AS1Q9NZ38 188 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 GNG12Q9UBI6 72 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 FBLN5Q9UBX5 448 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 TCF19Q9Y242 345 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 LRRC42Q9Y546 428 aa3.54□□□□□ -1.84
SNX1-205ENST00000559339 UBE2QL1A1L167 161 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 FAM172BPA6NC97 362 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 NPIPB11E5RHQ5 1161 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 J3QR06 171 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 M0QZK8 103 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 SLC17A2O00624 439 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 SLC22A1O15245 554 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 PDCD6O75340 191 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 MMP23AO75900 390 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 RGS11O94810 467 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 IGLV1-47P01700 117 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 IGHV3-7P01780 117 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 MT-ND4P03905 459 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 VSIG8P0DPA2 414 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 PSMB9P28065 219 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 KIR2DS4P43632 304 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 MAP2K4P45985 399 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 GNG10P50151 68 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 RAB7AP51149 207 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 RPS25P62851 125 aaKnown RBP3.53□□□□□ -1.84
SNX1-205ENST00000559339 RAB11BQ15907 218 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 Q3ZCU0 254 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 C1orf100Q5SVJ3 147 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 TPTE2P1Q5T6R2 138 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 STEAP3Q658P3 488 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 ZNF497Q6ZNH5 498 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 Q6ZSV7 163 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 C16orf82Q7Z2V1 217 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 OR2W3Q7Z3T1 314 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 ZNF554Q86TJ5 538 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 LRRTM1Q86UE6 522 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 LYPD6Q86Y78 171 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 TMEM104Q8NE00 496 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 OR52M1Q8NGK5 317 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms