RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 KCNE3Q9Y6H6 103 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 C2CD3Q4AC94 2353 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 CHD5Q8TDI0 1954 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 PDZD2O15018 2839 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ADGRG4Q8IZF6 3080 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 CENPEQ02224 2701 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ICE1Q9Y2F5 2266 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 A0A1B0GVX0 72 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 A0A1W2PRD5 423 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 TMEM120BA0PK00 339 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 C4orf51C9J302 202 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 SCAMP2O15127 329 aaKnown RBP2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ANGPTL7O43827 346 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 REM1O75628 298 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 HLA-HP01893 362 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 SLC25A16P16260 332 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ZNF708P17019 499 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 IL32P24001 234 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 MAGEA6P43360 314 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 GPR4P46093 362 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 SLCO1A2P46721 670 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 UBE2AP49459 152 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 CRISP1P54107 249 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 DSCR4P56555 118 aaPredicted RBP2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ATP6V0D1P61421 351 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 TSNQ15631 228 aaKnown RBP2.51□□□□□ -2.01
PTCH1-216ENST00000548379 CDKL4Q5MAI5 379 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 KHDRBS2Q5VWX1 349 aaKnown RBP2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ULK3Q6PHR2 472 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 C12orf54Q6X4T0 127 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 SSX8Q7RTT4 187 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 PAGE2Q7Z2X7 111 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 FAM122BQ7Z309 247 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ZNF550Q7Z398 422 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 PLCZ1Q86YW0 608 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 SAXO1Q8IYX7 474 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 CMTM1Q8IZ96 169 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 FAM86B1Q8N7N1 296 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 INO80EQ8NBZ0 244 aaPredicted RBP2.51□□□□□ -2.01
PTCH1-216ENST00000548379 LYPD6BQ8NI32 183 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 NDNFQ8TB73 568 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 CDKL2Q92772 493 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 MAGOHBQ96A72 148 aaKnown RBP2.51□□□□□ -2.01
PTCH1-216ENST00000548379 STARD4Q96DR4 205 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ZMYND19Q96E35 227 aaPredicted RBP2.51□□□□□ -2.01
PTCH1-216ENST00000548379 COL21A1Q96P44 957 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ACTR3CQ9C0K3 210 aaPredicted RBP2.51□□□□□ -2.01
PTCH1-216ENST00000548379 PARP12Q9H0J9 701 aaKnown RBP2.51□□□□□ -2.01
PTCH1-216ENST00000548379 POPDC3Q9HBV1 291 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 NOX3Q9HBY0 568 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ISYNA1Q9NPH2 558 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 PAQR5Q9NXK6 330 aaPredicted RBP2.51□□□□□ -2.01
PTCH1-216ENST00000548379 OPTCQ9UBM4 332 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 KLK12Q9UKR0 248 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 MCTS1Q9ULC4 181 aaKnown RBP2.51□□□□□ -2.01
PTCH1-216ENST00000548379 GUCA1BQ9UMX6 200 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 SAR1BQ9Y6B6 198 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ZNF780BQ9Y6R6 833 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ITPR2Q14571 2701 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 ARID1AO14497 2285 aa2.51□□□□□ -2.01
PTCH1-216ENST00000548379 APCP25054 2843 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 ANKRD36A6QL64 1941 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 HIVEP1P15822 2718 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 TRAV6A0A075B6T7 132 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 IGLV1-36A0A0B4J1U3 117 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 IGHV3-74A0A0B4J1X5 117 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 OR6C70A6NIJ9 312 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 SYCE1LA8MT33 242 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 INS-IGF2F8WCM5 200 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 TCF21O43680 179 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 AQP8O94778 261 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 IFNW1P05000 195 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 CT45A6P0DMU7 189 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 CT45A5P0DMU8 189 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 CT45A7P0DMV0 189 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 ZNF823P16415 610 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 CSNK2A2P19784 350 aaPredicted RBP2.5□□□□□ -2.01
PTCH1-216ENST00000548379 ME2P23368 584 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 MAS1LP35410 378 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 SRP14P37108 136 aaKnown RBP2.5□□□□□ -2.01
PTCH1-216ENST00000548379 XKP51811 444 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 RND2P52198 227 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 PSMD4P55036 377 aaKnown RBP2.5□□□□□ -2.01
PTCH1-216ENST00000548379 LCN2P80188 198 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 GGTLC2Q14390 218 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 OR7A5Q15622 319 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 ZNHIT3Q15649 155 aaPredicted RBP2.5□□□□□ -2.01
PTCH1-216ENST00000548379 NNATQ16517 81 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 CT45A1Q5HYN5 189 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 C6orf52Q5T4I8 152 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 CCNJQ5T5M9 372 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 HES5Q5TA89 166 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 GPR107Q5VW38 600 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 SBSNQ6UWP8 590 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 ASCL4Q6XD76 172 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 FBXO36Q8NEA4 188 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 MNS1Q8NEH6 495 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 OR6K3Q8NGY3 331 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 OR5B3Q8NH48 314 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 CT45A3Q8NHU0 189 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms