RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 NKX2-2O95096 273 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 DUS4LO95620 317 aaKnown RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 SEMA4FO95754 770 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 SOD1P00441 154 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 TIMP1P01033 207 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 IFNA1P01562 189 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 IGHG3P01860 377 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 GBAP04062 536 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 CTSLP07711 333 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 IL3P08700 152 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 OR4A8P0C604 315 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ZNF705DP0CH99 300 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ZNF705BP0CI00 300 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 PGA3P0DJD8 388 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 OR12D1P0DN82 309 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ACP2P11117 423 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 PSG2P11465 335 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 CEACAM1P13688 526 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 CD1DP15813 335 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ELK1P19419 428 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 FUT1P19526 365 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 FUT3P21217 361 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ATP6V0CP27449 155 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 HTR1FP30939 366 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 GABRA3P34903 492 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ARL2P36404 184 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 FRKP42685 505 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 GPR6P46095 362 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 SULT1A2P50226 295 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 HNRNPA3P51991 378 aaKnown RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ATP5J2P56134 94 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 RIPPLY3P57055 190 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 RPS25P62851 125 aaKnown RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 SSBP1Q04837 148 aaKnown RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 DHRS2Q13268 280 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 EIF2B1Q14232 305 aaKnown RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 EXT1Q16394 746 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 BATFQ16520 125 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ACKR1Q16570 336 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 SGCBQ16585 318 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 HIST3H3Q16695 136 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 TRMT12Q53H54 448 aaKnown RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 PDZD11Q5EBL8 140 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 SLC25A30Q5SVS4 291 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 LCN10Q6JVE6 187 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 TMEM182Q6ZP80 229 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 C15orf39Q6ZRI6 1047 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 CENPVQ7Z7K6 275 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 TMEM173Q86WV6 379 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 CMTM1Q8IZ96 169 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 LRRC75A-AS1Q8N1F1 130 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 RNF175Q8N4F7 328 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 BMPERQ8N8U9 685 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ADAD2Q8NCV1 583 aaKnown RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 B3GNT7Q8NFL0 401 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 OR8G5Q8NG78 346 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 OR11G2Q8NGC1 345 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 OR4K1Q8NGD4 311 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 OR6K2Q8NGY2 324 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 OR6N1Q8NGY5 312 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 OR52P1PQ8NH57 321 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 GPR119Q8TDV5 335 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 FRZBQ92765 325 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 FAM131CQ96AQ9 280 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 SEH1LQ96EE3 360 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 IMP4Q96G21 291 aaKnown RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 LRRC3BQ96PB8 259 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 TSSK3Q96PN8 268 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 LITAFQ99732 161 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ST6GALNAC5Q9BVH7 336 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 NUDT9Q9BW91 350 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 FGFBP2Q9BYJ0 223 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 SLC17A9Q9BYT1 436 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 TCEAL2Q9H3H9 227 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 TUBB1Q9H4B7 451 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 EGLN3Q9H6Z9 239 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 CDH20Q9HBT6 801 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 LYRM4Q9HD34 91 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 APMAPQ9HDC9 416 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 A4GALTQ9NPC4 353 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 UBE2TQ9NPD8 197 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 SLC52A3Q9NQ40 469 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 MEPEQ9NQ76 525 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 PXMP2Q9NR77 195 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ONECUT1Q9UBC0 465 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 FBXW11Q9UKB1 542 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ASF1AQ9Y294 204 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 SLC17A4Q9Y2C5 497 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 TSSC4Q9Y5U2 329 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ENPP4Q9Y6X5 453 aa3.57□□□□□ -1.84
ITGB1-219ENST00000534049 ZNF638Q14966 1978 aaKnown RBP3.56□□□□□ -1.84
ITGB1-219ENST00000534049 PTPRSQ13332 1948 aa3.56□□□□□ -1.84
ITGB1-219ENST00000534049 IGKV3D-15A0A087WSY6 115 aa3.56□□□□□ -1.84
ITGB1-219ENST00000534049 BORCS7-ASMTA0A0B4J1R7 106 aa3.56□□□□□ -1.84
ITGB1-219ENST00000534049 A0A0J9YY10 115 aa3.56□□□□□ -1.84
ITGB1-219ENST00000534049 A0A1B0GX78 115 aa3.56□□□□□ -1.84
ITGB1-219ENST00000534049 NPIPB15A6NHN6 443 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-219ENST00000534049 EPOPA6NHQ4 379 aa3.56□□□□□ -1.84
ITGB1-219ENST00000534049 CLDN34H7C241 214 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms