RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 TIMM23O14925 209 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 GPR137BO60478 399 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 PDCD6O75340 191 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 IGHV4-59P01825 116 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 RBP4P02753 201 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 GLAP06280 429 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 FUT3P21217 361 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 SDC2P34741 201 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 GLP1RP43220 463 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 GLIPR1P48060 266 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 ERVFRD-1P60508 538 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 VBP1P61758 197 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 QRFPP83859 136 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 PAX5Q02548 391 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 MXD1Q05195 221 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 NKAPLQ5M9Q1 402 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 RSBN1Q5VWQ0 802 aaPredicted RBP8.27□□□□□ -1.09
VPS28-204ENST00000526054 SFXN4Q6P4A7 337 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 METAP1DQ6UB28 335 aaPredicted RBP8.27□□□□□ -1.09
VPS28-204ENST00000526054 TCF23Q7RTU1 214 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 Q8N7P7 452 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 MMP27Q9H306 513 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 RNF167Q9H6Y7 350 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 LIN7BQ9HAP6 207 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 TAS2R3Q9NYW6 316 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 KIF25Q9UIL4 384 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 RNF114Q9Y508 228 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 PEX16Q9Y5Y5 336 aa8.27□□□□□ -1.09
VPS28-204ENST00000526054 NOTCH1P46531 2555 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 TMEM272A0A1B0GTI8 110 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 ZNF729A6NN14 1252 aaPredicted RBP8.26□□□□□ -1.09
VPS28-204ENST00000526054 C17orf98A8MV24 154 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 CA11O75493 328 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 CLPXO76031 633 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 SERPINB10P48595 397 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 DLX6P56179 175 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 SPCS2Q15005 226 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 C2orf76Q3KRA6 126 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 SLC35E4Q6ICL7 350 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 NR2C2APQ86WQ0 139 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 LDLRAD3Q86YD5 345 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 CROCCP3Q8IVE0 287 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 PDZD9Q8IXQ8 264 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 ZNF565Q8N9K5 539 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 OR56B1Q8NGI3 324 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 NDNFQ8TB73 568 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 PLPPR1Q8TBJ4 325 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 CORO2AQ92828 525 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 LPAR5Q9H1C0 372 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 DCSTAMPQ9H295 470 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 HEXA-AS1Q9H8Q6 139 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 ETAA1Q9NY74 926 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 PTTG2Q9NZH5 202 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 ZNF581Q9P0T4 197 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 DAPK2Q9UIK4 370 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 RAB22AQ9UL26 194 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 SESN1Q9Y6P5 492 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 VWFP04275 2813 aa8.26□□□□□ -1.09
VPS28-204ENST00000526054 MEX3AA1L020 520 aaKnown RBP8.25□□□□□ -1.09
VPS28-204ENST00000526054 BTBD17A6NE02 478 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 RNASEK-C17orf49H0YIS7 233 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 LDLRAD4O15165 306 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 TMEM127O75204 238 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 IL1AP01583 271 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 CLEC2LP0C7M8 214 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 IGHV1-8P0DP01 117 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 SLC2A2P11168 524 aaPredicted RBP8.25□□□□□ -1.09
VPS28-204ENST00000526054 RAB6AP20340 208 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 CHATP28329 748 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 BLVRBP30043 206 aaPredicted RBP8.25□□□□□ -1.09
VPS28-204ENST00000526054 IER3P46695 156 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 UBE2E1P51965 193 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 KLRD1Q13241 179 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 SIGIRRQ6IA17 410 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 OR52W1Q6IF63 320 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 ZNF782Q6ZMW2 699 aaPredicted RBP8.25□□□□□ -1.09
VPS28-204ENST00000526054 OR13D1Q8NGV5 346 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 LINC01006Q8NI28 216 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 TNFRSF14Q92956 283 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 PTX4Q96A99 478 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 NICN1Q9BSH3 213 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 DCUN1D5Q9BTE7 237 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 DPAGT1Q9H3H5 408 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 FAM96BQ9Y3D0 163 aa8.25□□□□□ -1.09
VPS28-204ENST00000526054 A0A0A6YYD4 124 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 A0A0B4J203 849 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 UBE2QL1A1L167 161 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 METTL21EPA6NDL7 271 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 NPFFO15130 113 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 FBP1P09467 338 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 COX7A1P24310 79 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 SOX6P35712 828 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 TGFBR1P36897 503 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 VEGFCP49767 419 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 DLX1P56177 255 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 SCAND1P57086 179 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 KRTAP10-3P60369 221 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 PRB3Q04118 309 aaPredicted RBP8.24□□□□□ -1.09
VPS28-204ENST00000526054 C6orf183Q5T699 404 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 IDNKQ5T6J7 187 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms