RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 RHBDL2Q9NX52 303 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FBLN5Q9UBX5 448 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 AK3Q9UIJ7 227 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 ELF5Q9UKW6 265 aaPredicted RBP8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 KPTNQ9Y664 436 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 LINC00312Q9Y6C7 94 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 KIAA2026Q5HYC2 2103 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 RAB27BO00194 218 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 CRLF1O75462 422 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 CLPXO76031 633 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 IGHV3-7P01780 117 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 MT-ND4P03905 459 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 SRD5A1P18405 259 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 PAX6P26367 422 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 ERP29P30040 261 aaKnown RBP8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 KCNJ3P48549 501 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 TMBIM6P55061 237 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 MEF2CQ06413 473 aaPredicted RBP8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 BLMHQ13867 455 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 C17orf58Q2M2W7 97 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 CHRFAM7AQ494W8 412 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 SLC35E4Q6ICL7 350 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 HCP5Q6MZN7 132 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 BCL6BQ8N143 479 aaPredicted RBP8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 PRR18Q8N4B5 295 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 SAMD12Q8N8I0 201 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 OR56B1Q8NGI3 324 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 OR10R2Q8NGX6 335 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 RFESDQ8TAC1 157 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 TNFRSF14Q92956 283 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 RAB3CQ96E17 227 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 DCUN1D5Q9BTE7 237 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 SUCNR1Q9BXA5 334 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 CHMP1AQ9HD42 196 aaPredicted RBP8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 PLEKHJ1Q9NW61 149 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 TMEM160Q9NX00 188 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 CALYQ9NYX4 217 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 ZNRD1Q9P1U0 126 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 COMMD3Q9UBI1 195 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 LPAR3Q9UBY5 353 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 CDC42EP3Q9UKI2 254 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 TRAPPC2LQ9UL33 140 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 KCNK7Q9Y2U2 307 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 ETV7Q9Y603 341 aa8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 NIPBLQ6KC79 2804 aaeCLIP8.02□□□□□ -1.13
TOPBP1-209ENST00000513818 IGHV3-43A0A0B4J1X8 118 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 CENPVL3A0A0U1RRI6 287 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 FUOMA2VDF0 154 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 C17orf98A8MV24 154 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 C12orf77C9JDV5 145 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 M0R1W7 72 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 MFNGO00587 321 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 HPGDSO60760 199 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 EIF4EP06730 217 aaKnown RBP8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 IGHV1-8P0DP01 117 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 IGHV3-43DP0DP04 118 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 PTHLHP12272 177 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 HIST1H1DP16402 221 aaKnown RBP8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 RCC1P18754 421 aaPredicted RBP8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 EPHA1P21709 976 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 CDK2P24941 298 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 NFYBP25208 207 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 RORCP51449 518 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 SRSF2Q01130 221 aaKnown RBP8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 RBM39Q14498 530 aaKnown RBP8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 Q6ZTK2 550 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 NANPQ8TBE9 248 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 DYNC2LI1Q8TCX1 351 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 MAFIPQ8WZ33 124 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 GCDHQ92947 438 aaPredicted RBP8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 LEAP2Q969E1 77 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 SLC6A7Q99884 636 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 METTL8Q9H825 291 aaKnown RBP8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 OR6C3Q9NZP0 311 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 ABRACLQ9P1F3 81 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 SPATA2Q9UM82 520 aa8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 UBE2J1Q9Y385 318 aaPredicted RBP8.01□□□□□ -1.13
TOPBP1-209ENST00000513818 IGHV1-69DA0A0B4J2H0 117 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 A0A1W2PPH5 198 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 DPPA5A6NC42 116 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 METTL21EPA6NDL7 271 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 TMEM235A6NFC5 223 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 ZNF729A6NN14 1252 aaPredicted RBP8□□□□□ -1.13
TOPBP1-209ENST00000513818 IGHV1-69P01742 117 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 FCER2P06734 321 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 PRTN3P24158 256 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 GNG10P50151 68 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 UBE2NLQ5JXB2 153 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 GPR157Q5UAW9 335 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 CROCCP3Q8IVE0 287 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 OR10V1Q8NGI7 309 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 OR1L1Q8NH94 360 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 NUDCD2Q8WVJ2 157 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 C17orf50Q8WW18 174 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 CORO2AQ92828 525 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 PTX4Q96A99 478 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 KIRREL1Q96J84 757 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 ZNF48Q96MX3 618 aaPredicted RBP8□□□□□ -1.13
TOPBP1-209ENST00000513818 CMSS1Q9BQ75 279 aaKnown RBP8□□□□□ -1.13
TOPBP1-209ENST00000513818 GAL3ST2Q9H3Q3 398 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms