RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 METTL21CQ5VZV1 264 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 Q8IYB0 196 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 OR2C3Q8N628 320 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 OR13A1Q8NGR1 328 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 OVOL2Q9BRP0 275 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 TTTY10Q9BZA0 68 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 EXOSC4Q9NPD3 245 aaKnown RBP6.93□□□□□ -1.3
SSBP1-212ENST00000489378 LAMP5Q9UJQ1 280 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 COPS3Q9UNS2 423 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 BAIAP2Q9UQB8 552 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 AP3M1Q9Y2T2 418 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 SRSF10O75494 262 aaKnown RBP6.93□□□□□ -1.3
SSBP1-212ENST00000489378 GASTP01350 101 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 IL1AP01583 271 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 CSN2P05814 226 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 BLVRBP30043 206 aaPredicted RBP6.93□□□□□ -1.3
SSBP1-212ENST00000489378 HTR1FP30939 366 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 FUT6P51993 359 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 CD81P60033 236 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 SUMO1P63165 101 aaKnown RBP6.93□□□□□ -1.3
SSBP1-212ENST00000489378 C19orf54Q5BKX5 351 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 LCE5AQ5TCM9 118 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 Q6P435 159 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 ARPINQ7Z6K5 226 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 IQCF1Q8N6M8 205 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 RTN4IP1Q8WWV3 396 aaPredicted RBP6.93□□□□□ -1.3
SSBP1-212ENST00000489378 RGP1Q92546 391 aaPredicted RBP6.93□□□□□ -1.3
SSBP1-212ENST00000489378 SRD5A3Q9H8P0 318 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 LINC00574Q9H8X3 128 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 HMG20AQ9NP66 347 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 INTS9Q9NV88 658 aaKnown RBP6.93□□□□□ -1.3
SSBP1-212ENST00000489378 FBXO7Q9Y3I1 522 aa6.93□□□□□ -1.3
SSBP1-212ENST00000489378 IGHV7-81A0A0B4J1V7 117 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 A0A1W2PN81 502 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 NPIPB11E5RHQ5 1161 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 SLC33A1O00400 549 aaPredicted RBP6.92□□□□□ -1.3
SSBP1-212ENST00000489378 TFAP2AP05549 437 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 CD7P09564 240 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 ZNF44P15621 663 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 CHRNA7P36544 502 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 RAB40BQ12829 278 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 MAPRE2Q15555 327 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 ECSCRQ19T08 205 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 ZNF829Q3KNS6 432 aaPredicted RBP6.92□□□□□ -1.3
SSBP1-212ENST00000489378 LCN12Q6JVE5 192 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 DEGS2Q6QHC5 323 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 Q6ZSR3 168 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 ELMOD2Q8IZ81 293 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 YIPF7Q8N8F6 280 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 OR9G4Q8NGQ1 327 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 SPACA5Q96QH8 159 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 MBOAT4Q96T53 435 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 KCTD14Q9BQ13 255 aaPredicted RBP6.92□□□□□ -1.3
SSBP1-212ENST00000489378 NEURL2Q9BR09 285 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 MROQ9BYG7 248 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 PLEKHA1Q9HB21 404 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 MRM2Q9UI43 246 aaKnown RBP6.92□□□□□ -1.3
SSBP1-212ENST00000489378 KIF25Q9UIL4 384 aa6.92□□□□□ -1.3
SSBP1-212ENST00000489378 SAMD4AQ9UPU9 718 aaKnown RBP6.92□□□□□ -1.3
SSBP1-212ENST00000489378 MEIKINA0A087WXM9 373 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 TRAV39A0A0B4J263 110 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 IGKV1-12A0A0C4DH73 117 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 DHRS7CA6NNS2 312 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 LOC110117498-PIK3R3F6TDL0 507 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 HSPB6O14558 160 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 MAGEB4O15481 346 aaPredicted RBP6.91□□□□□ -1.3
SSBP1-212ENST00000489378 IGKV1D-12P01611 117 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 SSTR5P35346 364 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 NDPQ00604 133 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 ROM1Q03395 351 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 ODF1Q14990 250 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 MMDQ15546 238 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 BCL2L15Q5TBC7 163 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 GLYATQ6IB77 296 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 PLEKHG7Q6ZR37 379 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 LINC00336Q6ZUF6 198 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 ZNF679Q8IYX0 411 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 Q8N402 240 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 AQP11Q8NBQ7 271 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 ZBTB34Q8NCN2 500 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 BBS1Q8NFJ9 593 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 MRGPRDQ8TDS7 321 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 BORCS8Q96FH0 119 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 PYURFQ96I23 114 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 RITA1Q96K30 269 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 COMMD4Q9H0A8 199 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 SLC25A19Q9HC21 320 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 TMBIM4Q9HC24 238 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 SAR1AQ9NR31 198 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 KRT84Q9NSB2 600 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 ETAA1Q9NY74 926 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 FOXA2Q9Y261 457 aaPredicted RBP6.91□□□□□ -1.3
SSBP1-212ENST00000489378 MYRFQ9Y2G1 1151 aa6.91□□□□□ -1.3
SSBP1-212ENST00000489378 DYNC1I1O14576 645 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 ARPC1BO15143 372 aaKnown RBP6.9□□□□□ -1.31
SSBP1-212ENST00000489378 ZNF254O75437 659 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 HLA-DRB1P01911 266 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 CSN3P07498 182 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 CCL1P22362 96 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 C21orf33P30042 268 aaPredicted RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms