RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ALX4Q9H161 411 aaPredicted RBP1.18□□□□□ -2.22
GCFC2-209ENST00000486016 ARAP3Q8WWN8 1544 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 MYO15BQ96JP2 1530 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 ARGFXA6NJG6 315 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 J3QRE1 110 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 SULT1C2O00338 296 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 LECT2O14960 151 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 PLXNB1O43157 2135 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 EEF1E1O43324 174 aaKnown RBP1.17□□□□□ -2.22
GCFC2-209ENST00000486016 SOX14O95416 240 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 GUSBP08236 651 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 CTSGP08311 255 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 PSKH1P11801 424 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 NQO2P16083 231 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 AKR1C4P17516 323 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 UGT2B10P36537 528 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 HSPA13P48723 471 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 RAB2AP61019 212 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 RAB31Q13636 194 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 PYCR3Q53H96 274 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 C10orf91Q5T1B1 145 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 HES3Q5TGS1 186 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 SSX7Q7RTT5 188 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 OR10D4PQ8NGN7 298 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 CCDC127Q96BQ5 260 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 DDIT4LQ96D03 193 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 OR8B2Q96RD0 313 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 OR51E2Q9H255 320 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 METTL17Q9H7H0 456 aaPredicted RBP1.17□□□□□ -2.22
GCFC2-209ENST00000486016 TREM1Q9NP99 234 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 KCNIP2Q9NS61 270 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 CHMP5Q9NZZ3 219 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 SLC23A2Q9UGH3 650 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 RPUSD1Q9UJJ7 312 aaKnown RBP1.17□□□□□ -2.22
GCFC2-209ENST00000486016 SAMHD1Q9Y3Z3 626 aaKnown RBP1.17□□□□□ -2.22
GCFC2-209ENST00000486016 LINC00588Q9Y4M8 146 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 PHLDA3Q9Y5J5 127 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 URGCP-MRPS24S4R325 110 aa1.17□□□□□ -2.22
GCFC2-209ENST00000486016 BRD4O60885 1362 aaPredicted RBP1.17□□□□□ -2.22
GCFC2-209ENST00000486016 USP42Q9H9J4 1324 aaKnown RBP1.16□□□□□ -2.22
GCFC2-209ENST00000486016 GPR171O14626 319 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 ZNF73O43830 326 aaPredicted RBP1.16□□□□□ -2.22
GCFC2-209ENST00000486016 LTAP01374 205 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 LIMS3P0CW19 117 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 LIMS4P0CW20 117 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 SYT1P21579 422 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 FUSP35637 526 aaKnown RBP eCLIP1.16□□□□□ -2.22
GCFC2-209ENST00000486016 COILP38432 576 aaPredicted RBP1.16□□□□□ -2.22
GCFC2-209ENST00000486016 SPAM1P38567 509 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 INPP1P49441 399 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 DYNLL1P63167 89 aaKnown RBP1.16□□□□□ -2.22
GCFC2-209ENST00000486016 APOFQ13790 326 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 CST6Q15828 149 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 USF2Q15853 346 aaPredicted RBP1.16□□□□□ -2.22
GCFC2-209ENST00000486016 TMEM249Q2WGJ8 235 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 NOXRED1Q6NXP6 359 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 TCF24Q7RTU0 167 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 TCF23Q7RTU1 214 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 SCXQ7RTU7 201 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 NIT1Q86X76 327 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 MSRB3Q8IXL7 192 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 MUC15Q8N387 334 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 C17orf78Q8N4C9 275 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 SPPL2BQ8TCT7 592 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 LMX1AQ8TE12 382 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 DTD1Q8TEA8 209 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 HIST1H2BAQ96A08 127 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 POTEKPQ9BYX7 375 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 MRPL16Q9NX20 251 aaKnown RBP1.16□□□□□ -2.22
GCFC2-209ENST00000486016 COL11A1P12107 1806 aaPredicted RBP1.16□□□□□ -2.22
GCFC2-209ENST00000486016 KIAA0232Q92628 1395 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 RAB3GAP2Q9H2M9 1393 aa1.16□□□□□ -2.22
GCFC2-209ENST00000486016 IGHV3OR15-7A0A075B7D8 119 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 IGKV1-12A0A0C4DH73 117 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 EFCAB9A8MZ26 197 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 J3QLI3 93 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 IGKV1D-12P01611 117 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 OR12D1P0DN82 309 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 ATF1P18846 271 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 SKP2Q13309 424 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 XRCC4Q13426 336 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 PAFAH1B3Q15102 231 aaKnown RBP1.15□□□□□ -2.23
GCFC2-209ENST00000486016 SYCP1Q15431 976 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 NIPAL1Q6NVV3 410 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 SELENOHQ8IZQ5 122 aaKnown RBP1.15□□□□□ -2.23
GCFC2-209ENST00000486016 SYCE1Q8N0S2 351 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 OR9I1Q8NGQ6 314 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 OR11L1Q8NGX0 322 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 RNASEH2CQ8TDP1 164 aaKnown RBP1.15□□□□□ -2.23
GCFC2-209ENST00000486016 GTF2H4Q92759 462 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 C20orf166-AS1Q96NR2 134 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 HBEGFQ99075 208 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 ACBD6Q9BR61 282 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 OR52A5Q9H2C5 316 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 ZNF286AQ9HBT8 521 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 DMAC2Q9NW81 257 aa1.15□□□□□ -2.23
GCFC2-209ENST00000486016 COL5A3P25940 1745 aaPredicted RBP1.15□□□□□ -2.23
GCFC2-209ENST00000486016 HSBP1L1C9JCN9 74 aa1.14□□□□□ -2.23
GCFC2-209ENST00000486016 G3V3Q6 166 aa1.14□□□□□ -2.23
GCFC2-209ENST00000486016 KLRC4-KLRK1H3BQV0 150 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms