RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 GABARAPH6UMI1 98 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 GSTZ1O43708 216 aaPredicted RBP10.01□□□□□ -0.81
PTPRF-213ENST00000481019 OR2H2O95918 312 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 IGHV1-69P01742 117 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 GLAP06280 429 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 GSTP1P09211 210 aaKnown RBP10.01□□□□□ -0.81
PTPRF-213ENST00000481019 PRSS3P35030 304 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 RPL31P62899 125 aaKnown RBP10.01□□□□□ -0.81
PTPRF-213ENST00000481019 PNLIPRP3Q17RR3 467 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 FAM89BQ8N5H3 189 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.01□□□□□ -0.81
PTPRF-213ENST00000481019 CHST4Q8NCG5 386 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 OR10R2Q8NGX6 335 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 SETD6Q8TBK2 473 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 TAF15Q92804 592 aaKnown RBP eCLIP10.01□□□□□ -0.81
PTPRF-213ENST00000481019 RAB3CQ96E17 227 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 NEDD4LQ96PU5 975 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 C19orf24Q9BVV8 132 aa10.01□□□□□ -0.81
PTPRF-213ENST00000481019 MS4A7Q9GZW8 240 aaPredicted RBP10.01□□□□□ -0.81
PTPRF-213ENST00000481019 SEBOXQ9HB31 216 aaPredicted RBP10.01□□□□□ -0.81
PTPRF-213ENST00000481019 TRBV23-1A0A0A0MS06 115 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 A0A0U1RQK1 487 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 SERPINE3A8MV23 424 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 CA11O75493 328 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 RBBP9O75884 186 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 GABRR1P24046 479 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 FPR2P25090 351 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 CBX5P45973 191 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 VEGFCP49767 419 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 TAS2R20P59543 309 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 MRPS15P82914 257 aaKnown RBP10□□□□□ -0.81
PTPRF-213ENST00000481019 UNC119Q13432 240 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 EDDM3AQ14507 147 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 IL13RA2Q14627 380 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 MPV17LQ2QL34 196 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 PIGYQ3MUY2 71 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 GPR157Q5UAW9 335 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 Q6ZTK2 550 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 ZNF418Q8TF45 676 aaPredicted RBP10□□□□□ -0.81
PTPRF-213ENST00000481019 C17orf50Q8WW18 174 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 AJUBAQ96IF1 538 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 SNX22Q96L94 193 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 Q96M66 194 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 THAP7Q9BT49 309 aaPredicted RBP10□□□□□ -0.81
PTPRF-213ENST00000481019 SUCNR1Q9BXA5 334 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 FAM234AQ9H0X4 552 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 LPAR5Q9H1C0 372 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 HSF4Q9ULV5 492 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 ST3GAL6Q9Y274 331 aa10□□□□□ -0.81
PTPRF-213ENST00000481019 TRAV24A0A0B4J272 114 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 DNAJC9-AS1A6NH13 148 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 J3QRK9 145 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 M0R1W7 72 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 RAB27BO00194 218 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 SLC33A1O00400 549 aaPredicted RBP9.99□□□□□ -0.81
PTPRF-213ENST00000481019 HLA-DQB1P01920 261 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 MELTFP08582 738 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 PAX6P26367 422 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 BLVRBP30043 206 aaPredicted RBP9.99□□□□□ -0.81
PTPRF-213ENST00000481019 EFNB2P52799 333 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 EDDM3BP56851 147 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 ACTBP60709 375 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 UBA52P62987 128 aaKnown RBP9.99□□□□□ -0.81
PTPRF-213ENST00000481019 ACTG1P63261 375 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 RBM39Q14498 530 aaKnown RBP9.99□□□□□ -0.81
PTPRF-213ENST00000481019 GRK1Q15835 563 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 CDNFQ49AH0 187 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 SPIN3Q5JUX0 258 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 OR10K2Q6IF99 312 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 MINDY2Q8NBR6 621 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 TMEM104Q8NE00 496 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 SMIM4Q8WVI0 70 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 COQ2Q96H96 371 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 ABHD1Q96SE0 405 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 C7orf50Q9BRJ6 194 aaKnown RBP9.99□□□□□ -0.81
PTPRF-213ENST00000481019 PPA2Q9H2U2 334 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 BANF2Q9H503 90 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 AUNIPQ9H7T9 357 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.99□□□□□ -0.813e-7■■■■■ 33.1
PTPRF-213ENST00000481019 ABCB10Q9NRK6 738 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 PLEKHJ1Q9NW61 149 aa9.99□□□□□ -0.81
PTPRF-213ENST00000481019 ZNF107Q9UII5 783 aaPredicted RBP9.99□□□□□ -0.81
PTPRF-213ENST00000481019 A0A0A6YYJ9 748 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 POM121CA8CG34 1229 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 SH2D1BO14796 132 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 MMP23AO75900 390 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 LPLP06858 475 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 IL7P13232 177 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 FUT3P21217 361 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 PRTN3P24158 256 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 LMO1P25800 156 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 FAUP35544 74 aaKnown RBP9.98□□□□□ -0.81
PTPRF-213ENST00000481019 GLIPR1P48060 266 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 RBM11P57052 281 aaKnown RBP9.98□□□□□ -0.81
PTPRF-213ENST00000481019 AESQ08117 197 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 BAMBIQ13145 260 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 SCGB2A2Q13296 93 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 SLC9A3R2Q15599 337 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 ZNF79Q15937 498 aa9.98□□□□□ -0.81
PTPRF-213ENST00000481019 RGS21Q2M5E4 152 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms