RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 A0A1B0GX30 115 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 POM121CA8CG34 1229 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 NPIPB11E5RHQ5 1161 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 TOR1AO14656 332 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 IGHV3-7P01780 117 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 FUT3P21217 361 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 PSMB9P28065 219 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 QRFPP83859 136 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 UNC119Q13432 240 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 RBM39Q14498 530 aaKnown RBP12.58□□□□□ -0.4
HMGA1-206ENST00000478214 P2RY14Q15391 338 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 KCNG3Q8TAE7 436 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 UBALD1Q8TB05 177 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 ZNF596Q8TC21 504 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 LEAP2Q969E1 77 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 PLGRKTQ9HBL7 147 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 ABCB10Q9NRK6 738 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 DPM3Q9P2X0 92 aa12.58□□□□□ -0.4
HMGA1-206ENST00000478214 A0A1B0GUS0 222 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 UBE2QL1A1L167 161 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 CLPSL1A2RUU4 121 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 TMEM14DPA8MWL7 114 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 C15orf65H3BRN8 121 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 AIPO00170 330 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 CCRL2O00421 344 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 SLC17A2O00624 439 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 CHST1O43916 411 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 PDCD6O75340 191 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 BPNT1O95861 308 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 GZMHP20718 246 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 RPS27AP62979 156 aaKnown RBP12.57□□□□□ -0.4
HMGA1-206ENST00000478214 HLA-DRB5Q30154 266 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 OLFML2AQ68BL7 652 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 ZNF773Q6PK81 442 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 CD200R1LQ6Q8B3 271 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 LINC01006Q8NI28 216 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 ARL11Q969Q4 196 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 TMEM59Q9BXS4 323 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 FBN3Q75N90 2809 aa12.57□□□□□ -0.4
HMGA1-206ENST00000478214 TRDV1A0A1B0GX56 115 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 SHISA3A0PJX4 238 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 GLAP06280 429 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 PRRX1P54821 245 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 CLDN12P56749 244 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 RAB11BQ15907 218 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 NKAPLQ5M9Q1 402 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 CCBE1Q6UXH8 406 aaPredicted RBP12.56□□□□□ -0.4
HMGA1-206ENST00000478214 GAPTQ8N292 157 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 OR10A7Q8NGE5 316 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 OR4K15Q8NH41 348 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 OR9G1Q8NH87 305 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 FCGR1BQ92637 280 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 NICN1Q9BSH3 213 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 TM2D1Q9BX74 207 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 PSG11Q9UQ72 335 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 TCF19Q9Y242 345 aa12.56□□□□□ -0.4
HMGA1-206ENST00000478214 A0A0A6YYD4 124 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 A6NDX4 124 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 LEUTXA8MZ59 168 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 LY6LH3BQJ8 138 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 BUB1B-PAK6H3BSN5 160 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 H3BUI4 141 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 J3QR06 171 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 F2RL2O00254 374 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 ORC5O43913 435 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 TSPAN9O75954 239 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 ARSBP15848 533 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 CHATP28329 748 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 GNG10P50151 68 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 DYNLT3P51808 116 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 OR10A3P58181 314 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 TPTE2P1Q5T6R2 138 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 SYT6Q5T7P8 510 aaPredicted RBP12.55□□□□□ -0.4
HMGA1-206ENST00000478214 C22orf42Q6IC83 251 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 FAM53AQ6NSI3 398 aaPredicted RBP12.55□□□□□ -0.4
HMGA1-206ENST00000478214 SHISA2Q6UWI4 295 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 TMEM219Q86XT9 240 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 OR51D1Q8NGF3 324 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 NEDD4LQ96PU5 975 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 SULT4A1Q9BR01 284 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 MMP28Q9H239 520 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 C16orf95Q9H693 158 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 RAB18Q9NP72 206 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 TRAPPC2LQ9UL33 140 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 RNF114Q9Y508 228 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 V9GY05 133 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 TRRAPQ9Y4A5 3859 aa12.55□□□□□ -0.4
HMGA1-206ENST00000478214 TRAV1-2A0A0B4J238 106 aa12.54□□□□□ -0.4
HMGA1-206ENST00000478214 C12orf77C9JDV5 145 aa12.54□□□□□ -0.4
HMGA1-206ENST00000478214 CA11O75493 328 aa12.54□□□□□ -0.4
HMGA1-206ENST00000478214 RCC1P18754 421 aaPredicted RBP12.54□□□□□ -0.4
HMGA1-206ENST00000478214 CD24P25063 80 aa12.54□□□□□ -0.4
HMGA1-206ENST00000478214 PSMD7P51665 324 aa12.54□□□□□ -0.4
HMGA1-206ENST00000478214 SRSF4Q08170 494 aaKnown RBP12.54□□□□□ -0.4
HMGA1-206ENST00000478214 KCTD21Q4G0X4 260 aa12.54□□□□□ -0.4
HMGA1-206ENST00000478214 HES5Q5TA89 166 aa12.54□□□□□ -0.4
HMGA1-206ENST00000478214 LIAT1Q6ZQX7 453 aa12.54□□□□□ -0.4
HMGA1-206ENST00000478214 OR2W3Q7Z3T1 314 aa12.54□□□□□ -0.4
HMGA1-206ENST00000478214 C6orf201Q7Z4U5 140 aa12.54□□□□□ -0.4
HMGA1-206ENST00000478214 WFDC12Q8WWY7 111 aa12.54□□□□□ -0.4
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