RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TMEM251Q8N6I4 163 aa16.29■□□□□ 0.2
VARS2-209ENST00000477288 ZNF552Q9H707 407 aaPredicted RBP16.29■□□□□ 0.2
VARS2-209ENST00000477288 ANXA10Q9UJ72 324 aa16.29■□□□□ 0.2
VARS2-209ENST00000477288 TTC3P53804 2025 aa16.29■□□□□ 0.2
VARS2-209ENST00000477288 IGHV3OR16-12A0A075B7B8 117 aa16.29■□□□□ 0.2
VARS2-209ENST00000477288 HRKO00198 91 aa16.29■□□□□ 0.2
VARS2-209ENST00000477288 RNASE1P07998 156 aaKnown RBP16.29■□□□□ 0.2
VARS2-209ENST00000477288 LSM6P62312 80 aaKnown RBP16.29■□□□□ 0.2
VARS2-209ENST00000477288 PLAURQ03405 335 aa16.29■□□□□ 0.2
VARS2-209ENST00000477288 NCMAPQ5T1S8 102 aa16.29■□□□□ 0.2
VARS2-209ENST00000477288 MSRB3Q8IXL7 192 aa16.29■□□□□ 0.2
VARS2-209ENST00000477288 ANAPC16Q96DE5 110 aa16.29■□□□□ 0.2
VARS2-209ENST00000477288 PRSS50Q9UI38 385 aa16.29■□□□□ 0.2
VARS2-209ENST00000477288 GZMHP20718 246 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 P2RY1P47900 373 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 CLEC2AQ6UVW9 174 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 IGKV3D-15A0A087WSY6 115 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 IGKV3-15P01624 115 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 C16orf82Q7Z2V1 217 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 EID2BQ96D98 161 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 CROCCQ5TZA2 2017 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 UBE2L6O14933 153 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 SMPD2O60906 423 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 CLEC18BQ6UXF7 455 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 OR1K1Q8NGR3 316 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 GMPPAQ96IJ6 420 aaPredicted RBP16.28■□□□□ 0.2
VARS2-209ENST00000477288 SLC25A10Q9UBX3 287 aaPredicted RBP16.28■□□□□ 0.2
VARS2-209ENST00000477288 ANKRD20A5PA0PJZ0 165 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 ZFP36L2P47974 494 aaKnown RBP16.28■□□□□ 0.2
VARS2-209ENST00000477288 IZUMO4Q1ZYL8 232 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 SUCLG1P53597 346 aaKnown RBP16.28■□□□□ 0.2
VARS2-209ENST00000477288 MDP1Q86V88 176 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 ARL6IP6Q8N6S5 226 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 TTTY12Q9BZ98 90 aa16.28■□□□□ 0.2
VARS2-209ENST00000477288 CLDN18P56856 261 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 ATG4DQ86TL0 474 aaPredicted RBP16.27■□□□□ 0.2
VARS2-209ENST00000477288 SOSTQ9BQB4 213 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 SLIRPQ9GZT3 109 aaKnown RBP16.27■□□□□ 0.2
VARS2-209ENST00000477288 IFT22Q9H7X7 185 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 CHODLQ9H9P2 273 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 AP4M1O00189 453 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 MBPP02686 304 aaPredicted RBP16.27■□□□□ 0.2
VARS2-209ENST00000477288 MRGPRFQ96AM1 343 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 STARD4Q96DR4 205 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 PRNDQ9UKY0 176 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 PAGE4O60829 102 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 DEDDO75618 318 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 ADIPOQQ15848 244 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 KHDC3LQ587J8 217 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 STPG1Q5TH74 334 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 INO80CQ6PI98 192 aaPredicted RBP16.27■□□□□ 0.2
VARS2-209ENST00000477288 HMGCLL1Q8TB92 370 aa16.27■□□□□ 0.2
VARS2-209ENST00000477288 ZNF324O75467 553 aaPredicted RBP16.27■□□□□ 0.19
VARS2-209ENST00000477288 AESQ08117 197 aa16.27■□□□□ 0.19
VARS2-209ENST00000477288 RRN3P1Q2M238 152 aa16.27■□□□□ 0.19
VARS2-209ENST00000477288 PIGYQ3MUY2 71 aa16.27■□□□□ 0.19
VARS2-209ENST00000477288 C19orf54Q5BKX5 351 aa16.27■□□□□ 0.19
VARS2-209ENST00000477288 C1orf53Q5VUE5 145 aa16.27■□□□□ 0.19
VARS2-209ENST00000477288 DPPA3Q6W0C5 159 aa16.27■□□□□ 0.19
VARS2-209ENST00000477288 APCSP02743 223 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 DAOP14920 347 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 LIFP15018 202 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 PPP1CCP36873 323 aaKnown RBP16.26■□□□□ 0.19
VARS2-209ENST00000477288 C19orf57Q0VDD7 668 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 SMRP1Q8NCR6 262 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 ISOC2Q96AB3 205 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 OR4C12Q96R67 309 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 TBX15Q96SF7 602 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 AURKAIP1Q9NWT8 199 aaPredicted RBP16.26■□□□□ 0.19
VARS2-209ENST00000477288 FLRT3Q9NZU0 649 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 STAG3L2P0CL84 134 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 KIR3DL2P43630 455 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 TMEM204Q9BSN7 226 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 LAMB2P55268 1798 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 SHROOM3Q8TF72 1996 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 THSD7AQ9UPZ6 1657 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 PPIAL4EA0A075B759 164 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 PPIAL4DF5H284 164 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 KLF7O75840 302 aaPredicted RBP16.26■□□□□ 0.19
VARS2-209ENST00000477288 SNRPCP09234 159 aaKnown RBP16.26■□□□□ 0.19
VARS2-209ENST00000477288 PPIAL4FP0DN26 164 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 IER3P46695 156 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 TWIST1Q15672 202 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 AWAT1Q58HT5 328 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 TMEM255AQ5JRV8 349 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 FBXW9Q5XUX1 488 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 LDLRAD3Q86YD5 345 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 RPS4Y2Q8TD47 263 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 PTX4Q96A99 478 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 OR2J1Q9GZK6 312 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 PPIAL4AQ9Y536 164 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 H7C2G1 150 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 PCMT1P22061 227 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 GALP22466 123 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 PSG6Q00889 435 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 NSUN5P2Q63ZY6 315 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 SLC16A13Q7RTY0 426 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 GBGT1Q8N5D6 347 aa16.26■□□□□ 0.19
VARS2-209ENST00000477288 J3QT63 122 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 SPINT1O43278 529 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms