RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 USP42Q9H9J4 1324 aaKnown RBP2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 PRR14LQ5THK1 2151 aa2.15□□□□□ -2.07
PRPF40A-208ENST00000472760 DHX57Q6P158 1386 aaKnown RBP2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 KLRC4-KLRK1H3BQV0 150 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 LECT2O14960 151 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 POLR3GO15318 223 aaPredicted RBP2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 ZNF73O43830 326 aaPredicted RBP2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 SOX14O95416 240 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 SLC35E2BP0CK96 405 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 OR12D1P0DN82 309 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 CBR1P16152 277 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 RCVRNP35243 200 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 SPAM1P38567 509 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 OR2B6P58173 313 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 DYNLL1P63167 89 aaKnown RBP2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 SYCP1Q15431 976 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 NIPAL1Q6NVV3 410 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 RORBQ92753 470 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 PPWD1Q96BP3 646 aaKnown RBP2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 POTEKPQ9BYX7 375 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 OR51E2Q9H255 320 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 TREM1Q9NP99 234 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 DMAC2Q9NW81 257 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 COMMD9Q9P000 198 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 LINC00588Q9Y4M8 146 aa2.14□□□□□ -2.07
PRPF40A-208ENST00000472760 VWA8A3KMH1 1905 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 ARAP3Q8WWN8 1544 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 EFCAB9A8MZ26 197 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 G3V3Q6 166 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 CRABP1P29762 137 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 ACTR1BP42025 376 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 TSPAN31Q12999 210 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 SKP2Q13309 424 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 PAFAH1B3Q15102 231 aaKnown RBP2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 ANGPT1Q15389 498 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 TMEM249Q2WGJ8 235 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 SYCE1Q8N0S2 351 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 OR10D4PQ8NGN7 298 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 MFSD8Q8NHS3 518 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 STACQ99469 402 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 DYSFO75923 2080 aa2.13□□□□□ -2.07
PRPF40A-208ENST00000472760 MYO15BQ96JP2 1530 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 RAB3GAP2Q9H2M9 1393 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 CACNA1DQ01668 2161 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 IGHV3OR15-7A0A075B7D8 119 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 GPR171O14626 319 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 TP53I11O14683 189 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 CYTH3O43739 400 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 SLC25A20O43772 301 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 EPPINO95925 133 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 LTAP01374 205 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 SYT1P21579 422 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 GABRA3P34903 492 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 KRTAP12-3P60328 96 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 C1QTNF8P60827 252 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 KRTAP6-3Q3LI67 103 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 SCXQ7RTU7 201 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 MUC15Q8N387 334 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 C17orf78Q8N4C9 275 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 OR9I1Q8NGQ6 314 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 GTF2H4Q92759 462 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 C20orf166-AS1Q96NR2 134 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 LRRC19Q9H756 370 aa2.12□□□□□ -2.07
PRPF40A-208ENST00000472760 BRD4O60885 1362 aaPredicted RBP2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 KIAA0232Q92628 1395 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 K7EQS6 105 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 TOR1AO14656 332 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 CRTAPO75718 401 aaPredicted RBP2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 RAB36O95755 333 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 LIMS3P0CW19 117 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 LIMS4P0CW20 117 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 FUSP35637 526 aaKnown RBP eCLIP2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 TMED1Q13445 227 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 ZBTB6Q15916 424 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 ZNF322Q6U7Q0 402 aaPredicted RBP2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 OR5D18Q8NGL1 313 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 OR11L1Q8NGX0 322 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 OR4K13Q8NH42 304 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 CCDC12Q8WUD4 166 aaPredicted RBP2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 HBEGFQ99075 208 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 ZNF286AQ9HBT8 521 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 VPREB3Q9UKI3 123 aa2.11□□□□□ -2.07
PRPF40A-208ENST00000472760 NLRC5Q86WI3 1866 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 B4DEV8 164 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 PHYHO14832 338 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 UGT2B11O75310 529 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 CDK14O94921 469 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 GP1BAP07359 652 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 GZMHP20718 246 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 PSMA1P25786 263 aaKnown RBP2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 GABARAPL2P60520 117 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 RBM48Q5RL73 367 aaKnown RBP2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 TTC33Q6PID6 262 aaPredicted RBP2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 ZBTB8OSQ8IWT0 167 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 OR4P4Q8NGL7 312 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 OR2V1Q8NHB1 315 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 GALMQ96C23 342 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 OR52A5Q9H2C5 316 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 TAS2R9Q9NYW1 312 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 FBXL3Q9UKT7 428 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms