RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 RAB12Q6IQ22 244 aa10.55□□□□□ -0.72
COL28A1-206ENST00000465339 SLC16A12Q6ZSM3 486 aa10.55□□□□□ -0.72
COL28A1-206ENST00000465339 SPARTQ8N0X7 666 aa10.55□□□□□ -0.72
COL28A1-206ENST00000465339 TMEM104Q8NE00 496 aa10.55□□□□□ -0.72
COL28A1-206ENST00000465339 OR6M1Q8NGM8 313 aa10.55□□□□□ -0.72
COL28A1-206ENST00000465339 KCNG3Q8TAE7 436 aa10.55□□□□□ -0.72
COL28A1-206ENST00000465339 Q96M66 194 aa10.55□□□□□ -0.72
COL28A1-206ENST00000465339 RAB18Q9NP72 206 aa10.55□□□□□ -0.72
COL28A1-206ENST00000465339 CALYQ9NYX4 217 aa10.55□□□□□ -0.72
COL28A1-206ENST00000465339 DPM3Q9P2X0 92 aa10.55□□□□□ -0.72
COL28A1-206ENST00000465339 PEX16Q9Y5Y5 336 aa10.55□□□□□ -0.72
COL28A1-206ENST00000465339 CLPSL1A2RUU4 121 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 EREGO14944 169 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 SLC22A1O15245 554 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 ORC5O43913 435 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 IL1AP01583 271 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 IGLV1-47P01700 117 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 MT-ND4P03905 459 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 MDKP21741 143 aaPredicted RBP10.54□□□□□ -0.72
COL28A1-206ENST00000465339 GALP22466 123 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 CALRP27797 417 aaKnown RBP10.54□□□□□ -0.72
COL28A1-206ENST00000465339 GDNFP39905 211 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 CEACAM3P40198 252 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 DYNLT3P51808 116 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 FAM189A2Q15884 450 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 SSX1Q16384 188 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 UBE2UQ5VVX9 321 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 SHISA2Q6UWI4 295 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 ZNF497Q6ZNH5 498 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 DYNAPQ8N1N2 210 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 DTX3Q8N9I9 347 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 NDNFQ8TB73 568 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 PIFOQ8TCI5 191 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 MRGPRDQ8TDS7 321 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 FCGR1BQ92637 280 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 TAF15Q92804 592 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL28A1-206ENST00000465339 KIRREL1Q96J84 757 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 ZNF286AQ9HBT8 521 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 ABCB10Q9NRK6 738 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 NDUFB11Q9NX14 153 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 IDI2-AS1Q9NZ38 188 aa10.54□□□□□ -0.72
COL28A1-206ENST00000465339 LEUTXA8MZ59 168 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 AIPO00170 330 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 CCRL2O00421 344 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 SLC17A2O00624 439 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 TSPAN9O75954 239 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 BPNT1O95861 308 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 MPIG6BO95866 241 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 NFYBP25208 207 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 PAX6P26367 422 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 LY6EQ16553 131 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 LDLRAD2Q5SZI1 272 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 CD200R1LQ6Q8B3 271 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 BAIAP2L2Q6UXY1 529 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 OR4P4Q8NGL7 312 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 OR9G1Q8NH87 305 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 FAM46BQ96A09 425 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 C16orf95Q9H693 158 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 PLGRKTQ9HBL7 147 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 RAB9BQ9NP90 201 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 ETAA1Q9NY74 926 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 PITPNC1Q9UKF7 332 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 HILPDAQ9Y5L2 63 aa10.53□□□□□ -0.72
COL28A1-206ENST00000465339 DNHD1Q96M86 4753 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 TRAV1-2A0A0B4J238 106 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 TRDV1A0A1B0GX56 115 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 BUB1B-PAK6H3BSN5 160 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 PDCD5O14737 125 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 PDCD6O75340 191 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 ARSBP15848 533 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 ARHGDIBP52566 201 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 RPS27AP62979 156 aaKnown RBP10.52□□□□□ -0.73
COL28A1-206ENST00000465339 QRFPP83859 136 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 HLA-DRB5Q30154 266 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 OLFML2AQ68BL7 652 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 SIGIRRQ6IA17 410 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 GAPTQ8N292 157 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 OR52M1Q8NGK5 317 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 LINC01006Q8NI28 216 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 RFESDQ8TAC1 157 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 CCDC107Q8WV48 283 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 ARL11Q969Q4 196 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 NEDD4LQ96PU5 975 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 GFI1Q99684 422 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 TMEM59Q9BXS4 323 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 TRAPPC2LQ9UL33 140 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 AK6Q9Y3D8 172 aaKnown RBP10.52□□□□□ -0.73
COL28A1-206ENST00000465339 AMMECR1Q9Y4X0 333 aaPredicted RBP10.52□□□□□ -0.73
COL28A1-206ENST00000465339 V9GY05 133 aa10.52□□□□□ -0.73
COL28A1-206ENST00000465339 TRAV39A0A0B4J263 110 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 UBE2QL1A1L167 161 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 FAM172BPA6NC97 362 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 TMEM14DPA8MWL7 114 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 OOSP1A8MZH6 123 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 J3QR06 171 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 BRS3P32247 399 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 SSTR5P35346 364 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 RAB13P51153 203 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 RAB11BQ15907 218 aa10.51□□□□□ -0.73
COL28A1-206ENST00000465339 PLA1AQ53H76 456 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms