RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 HSF1Q00613 529 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 DLX2Q07687 328 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-214ENST00000441542 KCNMB1Q16558 191 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 TMEM241Q24JQ0 296 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF573Q86YE8 665 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 TUSC5Q8IXB3 177 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 OR2T10Q8NGZ9 312 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 BAHD1Q8TBE0 780 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-214ENST00000441542 CIB3Q96Q77 187 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-214ENST00000441542 TBX21Q9UL17 535 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 TDRD6O60522 2096 aaKnown RBP6.52□□□□□ -1.37
HDAC9-214ENST00000441542 MAP1LC3B2A6NCE7 125 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 C22orf46C9J442 243 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 H0Y8G0 127 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 M0QZ24 198 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 TNFRSF10CO14798 259 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 SMAD7O15105 426 aaKnown RBP6.52□□□□□ -1.37
HDAC9-214ENST00000441542 IGHEP01854 428 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 GUSBP08236 651 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 ZFP36L1Q07352 338 aaKnown RBP6.52□□□□□ -1.37
HDAC9-214ENST00000441542 UNQ5815/PRO19632Q6UWF5 114 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 C6orf15Q6UXA7 325 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-214ENST00000441542 BHLHA15Q7RTS1 189 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-214ENST00000441542 CADM4Q8NFZ8 388 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 ELSPBP1Q96BH3 223 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 MAP1LC3BQ9GZQ8 125 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 GSX1Q9H4S2 264 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-214ENST00000441542 Q9N2K0 584 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 NECAP2Q9NVZ3 263 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 P4HTMQ9NXG6 502 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 VAX2Q9UIW0 290 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 SLC17A4Q9Y2C5 497 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 COL4A6Q14031 1691 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 KNTC1P50748 2209 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF737O75373 536 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 OR7C1O76099 320 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-214ENST00000441542 SLC6A8P48029 635 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 HIST1H3AP68431 136 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 FOXF1Q12946 379 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 RAB35Q15286 201 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 DTX1Q86Y01 620 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 CRIPAKQ8N1N5 446 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 ARHGEF39Q8N4T4 335 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 GBGT1Q8N5D6 347 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 FLVCR1-AS1Q8TAF5 88 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 PTPMT1Q8WUK0 201 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-214ENST00000441542 RPP25Q9BUL9 199 aaKnown RBP6.52□□□□□ -1.37
HDAC9-214ENST00000441542 MANBALQ9NQG1 85 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 SLC39A9Q9NUM3 307 aa6.52□□□□□ -1.37
HDAC9-214ENST00000441542 PCNX3Q9H6A9 2034 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 TRBV24-1A0A075B6N3 115 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 C3orf85A0A1B0GTC6 90 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 THBS3P49746 956 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 SOX8P57073 446 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 RPS21P63220 83 aaKnown RBP6.51□□□□□ -1.37
HDAC9-214ENST00000441542 GAGE1Q13065 139 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 SLC25A26Q70HW3 274 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 BAGE3Q86Y29 109 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 BAGE2Q86Y30 109 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 NOXO1Q8NFA2 376 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 CMTM2Q8TAZ6 248 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 MSI2Q96DH6 328 aaKnown RBP6.51□□□□□ -1.37
HDAC9-214ENST00000441542 GNPNAT1Q96EK6 184 aaPredicted RBP6.51□□□□□ -1.37
HDAC9-214ENST00000441542 HDAC8Q9BY41 377 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 LHFPL6Q9Y693 200 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 NOTCH4Q99466 2003 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 SDK2Q58EX2 2172 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 UBE2L5PA0A1B0GUS4 154 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 C1QTNF9BB2RNN3 333 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 PITX3O75364 302 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 RHBDL1O75783 438 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 OR5G3P0C626 314 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 PAX1P15863 534 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 SPANXN5Q5MJ07 72 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 PRR31Q5SQ13 230 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 LILRA6Q6PI73 481 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 Q6ZN92 141 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 TBC1D26Q86UD7 250 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 D2HGDHQ8N465 521 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 STPG4Q8N801 248 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 RNASEH2CQ8TDP1 164 aaKnown RBP6.51□□□□□ -1.37
HDAC9-214ENST00000441542 RCC1LQ96I51 464 aaKnown RBP6.51□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF385AQ96PM9 386 aaKnown RBP6.51□□□□□ -1.37
HDAC9-214ENST00000441542 ZDHHC11Q9H8X9 412 aa6.51□□□□□ -1.37
HDAC9-214ENST00000441542 BRWD1Q9NSI6 2320 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 NCOR1O75376 2440 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 A0A0J9YY10 115 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 TCRBV21S2A2A0A5A6 115 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 CEACAM18A8MTB9 384 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 B4DEV8 164 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 MS4A18H0YCH9 400 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 CCL25O15444 150 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 LILRA1O75019 489 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 SEMA4FO95754 770 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 EFEMP2O95967 443 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 PFN1P07737 140 aaKnown RBP6.5□□□□□ -1.37
HDAC9-214ENST00000441542 PMCHP20382 165 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 RND2P52198 227 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 RPL23P62829 140 aaKnown RBP6.5□□□□□ -1.37
HDAC9-214ENST00000441542 SLAQ13239 276 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms