RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 SLC22A1O15245 554 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 PDCD6O75340 191 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 CA11O75493 328 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 TSPAN9O75954 239 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 BPNT1O95861 308 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 MPIG6BO95866 241 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 MT-ND4P03905 459 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 VSIG8P0DPA2 414 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 CALRP27797 417 aaKnown RBP13.13□□□□□ -0.31
SMPD4-207ENST00000435455 ARHGDIBP52566 201 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 HLA-DRB5Q30154 266 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 BRICD5Q6PL45 260 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 SLC16A12Q6ZSM3 486 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 Q6ZSV7 163 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 LINC01006Q8NI28 216 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 FAM46BQ96A09 425 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 TMEM59Q9BXS4 323 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 PLGRKTQ9HBL7 147 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 RAB9BQ9NP90 201 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 NDUFB11Q9NX14 153 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 ETAA1Q9NY74 926 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 RNF114Q9Y508 228 aa13.13□□□□□ -0.31
SMPD4-207ENST00000435455 FAM172BPA6NC97 362 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 LEUTXA8MZ59 168 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 AIPO00170 330 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 F2RL2O00254 374 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 SLC17A2O00624 439 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 PSMD7P51665 324 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 RPS27AP62979 156 aaKnown RBP13.12□□□□□ -0.31
SMPD4-207ENST00000435455 SSX1Q16384 188 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 UBE2UQ5VVX9 321 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 SPARTQ8N0X7 666 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 DTX3Q8N9I9 347 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 OR9G1Q8NH87 305 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 SGMS2Q8NHU3 365 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 RFESDQ8TAC1 157 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 FCGR1BQ92637 280 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 AMMECR1Q9Y4X0 333 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-207ENST00000435455 NBEAL1Q6ZS30 2694 aa13.12□□□□□ -0.31
SMPD4-207ENST00000435455 TRAV39A0A0B4J263 110 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 OOSP1A8MZH6 123 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 BUB1B-PAK6H3BSN5 160 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 ORC5O43913 435 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 SSTR5P35346 364 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 C6orf183Q5T699 404 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 SIGIRRQ6IA17 410 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 TRAT1Q6PIZ9 186 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 CD200R1LQ6Q8B3 271 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 GAPTQ8N292 157 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 OR52M1Q8NGK5 317 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 OR4C13Q8NGP0 309 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 CCDC107Q8WV48 283 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 WFDC12Q8WWY7 111 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 ARL11Q969Q4 196 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 NEDD4LQ96PU5 975 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 NPFFR1Q9GZQ6 430 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 MMP28Q9H239 520 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 RANBP3Q9H6Z4 567 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-207ENST00000435455 TRAPPC2LQ9UL33 140 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 TCF19Q9Y242 345 aa13.11□□□□□ -0.31
SMPD4-207ENST00000435455 AK6Q9Y3D8 172 aaKnown RBP13.11□□□□□ -0.31
SMPD4-207ENST00000435455 A6NDX4 124 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 TMEM14DPA8MWL7 114 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 J3QR06 171 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 CCRL2O00421 344 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 SPINT2O43291 252 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 GALP22466 123 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 BRS3P32247 399 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 RAB13P51153 203 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 RAB11BQ15907 218 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 LTC4SQ16873 150 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 OR10K2Q6IF99 312 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 CCDC144NLQ6NUI1 221 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 ZNF773Q6PK81 442 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 OR2W3Q7Z3T1 314 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 GFI1Q99684 422 aa13.1□□□□□ -0.31
SMPD4-207ENST00000435455 PKD1L1Q8TDX9 2849 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 TRAV1-2A0A0B4J238 106 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 TRDV1A0A1B0GX56 115 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 UBE2QL1A1L167 161 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 C15orf65H3BRN8 121 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 PDCD5O14737 125 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 ARSBP15848 533 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 MYL9P24844 172 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 PSMB9P28065 219 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 CHATP28329 748 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 KIR2DS4P43632 304 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 PROK1P58294 105 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 QRFPP83859 136 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 UNC119Q13432 240 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 P2RY14Q15391 338 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 TMEM30BQ3MIR4 351 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 TPTE2P1Q5T6R2 138 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 SYT6Q5T7P8 510 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-207ENST00000435455 LEAP2Q969E1 77 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 URM1Q9BTM9 101 aaKnown RBP13.09□□□□□ -0.31
SMPD4-207ENST00000435455 TM2D1Q9BX74 207 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 FBLN5Q9UBX5 448 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 PSG11Q9UQ72 335 aa13.09□□□□□ -0.31
SMPD4-207ENST00000435455 V9GY05 133 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms