RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 SNX10Q9Y5X0 201 aa0.84□□□□□ -2.28
PMS1-210ENST00000424307 SIPA1L3O60292 1781 aaPredicted RBP0.84□□□□□ -2.28
PMS1-210ENST00000424307 SCN2AQ99250 2005 aa0.84□□□□□ -2.28
PMS1-210ENST00000424307 PIK3C2BO00750 1634 aa0.84□□□□□ -2.28
PMS1-210ENST00000424307 DEPDC5O75140 1603 aa0.84□□□□□ -2.28
PMS1-210ENST00000424307 LRP5O75197 1615 aa0.84□□□□□ -2.28
PMS1-210ENST00000424307 ZNF106Q9H2Y7 1883 aaKnown RBP0.84□□□□□ -2.28
PMS1-210ENST00000424307 PHRF1Q9P1Y6 1649 aaKnown RBP0.84□□□□□ -2.28
PMS1-210ENST00000424307 DOCK4Q8N1I0 1966 aa0.84□□□□□ -2.28
PMS1-210ENST00000424307 EXPH5Q8NEV8 1989 aa0.84□□□□□ -2.28
PMS1-210ENST00000424307 RGPD1P0DJD0 1748 aa0.84□□□□□ -2.28
PMS1-210ENST00000424307 ARAP2Q8WZ64 1704 aa0.84□□□□□ -2.28
PMS1-210ENST00000424307 RAI1Q7Z5J4 1906 aaPredicted RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 MROH2AA6NES4 1674 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 TET3O43151 1660 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 RIC1Q4ADV7 1423 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 CASKIN1Q8WXD9 1431 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 KIAA2026Q5HYC2 2103 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 COL6A3P12111 3177 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 NFAT5O94916 1531 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 NEXMIFQ5QGS0 1516 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 GPATCH8Q9UKJ3 1502 aaKnown RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 KIF26AQ9ULI4 1882 aaPredicted RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 CICQ96RK0 1608 aaPredicted RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 EIF2AK4Q9P2K8 1649 aaKnown RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 TRAV18A0A075B6X5 111 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 A0A087WX48 190 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 TRAV39A0A0B4J263 110 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 C7orf77A4D0Y5 90 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 MBLAC1A4D2B0 266 aaPredicted RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 OR11H12B2RN74 326 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 IDSB3KWA1 339 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 F5H5P2 479 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 F5H6K3 240 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 TRAPPC2LH3BP13 241 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 K7EN84 100 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 K7ERU9 68 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 NME4O00746 187 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 GOSR2O14653 212 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 GEMIN2O14893 280 aaKnown RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 RAB29O14966 203 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 PPP1R2P9O14990 202 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 RBFOX2O43251 390 aaKnown RBP eCLIP0.83□□□□□ -2.28
PMS1-210ENST00000424307 HCRTO43612 131 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 PDE6DO43924 150 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 OR7C2O60412 319 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 LRATO95237 230 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 MPZL1O95297 269 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 SYNGR4O95473 234 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 CDS2O95674 445 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 RAB36O95755 333 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 MT-CO2P00403 227 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 PTHP01270 115 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 C1QAP02745 245 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 TRGC2P03986 189 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 SERPINE2P07093 398 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 CD14P08571 375 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 OR10J4P0C629 311 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 TSPAN19P0C672 248 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 GKN3PP0CG01 181 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 BCKDHAP12694 445 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 PGAM2P15259 253 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 CSNK2A2P19784 350 aaPredicted RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 IDSP22304 550 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 NFYAP23511 347 aaPredicted RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 GDF1P27539 372 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 CD1CP29017 333 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 MIPP30301 263 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 KDELR2P33947 212 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 SSTR5P35346 364 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 RPL4P36578 427 aaKnown RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 GPR6P46095 362 aaPredicted RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 SULT1A1P50225 295 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 GEMP55040 296 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 DIO3P55073 304 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 CAV3P56539 151 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 OR12D2P58182 307 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 SEC61GP60059 68 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 PLP1P60201 277 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 ERVPABLB-1P60509 514 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 CDC42P60953 191 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 ERVK-16P61578 105 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 TBPL1P62380 186 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 RPL23AP62750 156 aaKnown RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 HBA1P69905 142 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 CCL7P80098 99 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 RHOGP84095 191 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 FABP5Q01469 135 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 ACVR1Q04771 509 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 BAXQ07812 192 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 RIPPLY1Q0D2K3 151 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 PJVKQ0ZLH3 352 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 SRSF6Q13247 344 aaKnown RBP0.83□□□□□ -2.28
PMS1-210ENST00000424307 OR2F1Q13607 317 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 ZNF266Q14584 549 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 SSX1Q16384 188 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 GABRA6Q16445 453 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 IL17AQ16552 155 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 GSG1Q2KHT4 349 aa0.83□□□□□ -2.28
PMS1-210ENST00000424307 C17orf58Q2M2W7 97 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms