RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 HOXA4Q00056 320 aaPredicted RBP16.68■□□□□ 0.26
COL13A1-205ENST00000398978 RNF212Q495C1 297 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 NMSQ5H8A3 153 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 RSG1Q9BU20 258 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 SPENQ96T58 3664 aaKnown RBP16.67■□□□□ 0.26
COL13A1-205ENST00000398978 PGLYRP1O75594 196 aaPredicted RBP16.67■□□□□ 0.26
COL13A1-205ENST00000398978 FABP1P07148 127 aa16.67■□□□□ 0.26
COL13A1-205ENST00000398978 CYC1P08574 325 aa16.67■□□□□ 0.26
COL13A1-205ENST00000398978 PAX9P55771 341 aa16.67■□□□□ 0.26
COL13A1-205ENST00000398978 SLC25A24Q6NUK1 477 aa16.67■□□□□ 0.26
COL13A1-205ENST00000398978 Q6ZRM9 215 aa16.67■□□□□ 0.26
COL13A1-205ENST00000398978 ZNF391Q9UJN7 358 aa16.67■□□□□ 0.26
COL13A1-205ENST00000398978 VSIRQ9H7M9 311 aa16.67■□□□□ 0.26
COL13A1-205ENST00000398978 GSN-AS1Q9NRJ2 163 aa16.67■□□□□ 0.26
COL13A1-205ENST00000398978 PLSCR2Q9NRY7 297 aa16.67■□□□□ 0.26
COL13A1-205ENST00000398978 ZMAT5Q9UDW3 170 aaKnown RBP16.67■□□□□ 0.26
COL13A1-205ENST00000398978 SELEP16581 610 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 PAX6P26367 422 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 FGF8P55075 233 aaPredicted RBP16.66■□□□□ 0.26
COL13A1-205ENST00000398978 MKXQ8IYA7 352 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 TAAR9Q96RI9 348 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 A0A1W2PR80 420 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 CXCL1P09341 107 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 UBE2KP61086 200 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 RHEBQ15382 184 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 CEACAM21Q3KPI0 293 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 HIKESHIQ53FT3 197 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 AKR1C8PQ5T2L2 129 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 OR2T2Q6IF00 324 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 COLCA1Q6ZS62 124 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 OR1K1Q8NGR3 316 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 GPR146Q96CH1 333 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 SLC25A31Q9H0C2 315 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 PPP1R3CQ9UQK1 317 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 CNOT4O95628 575 aaKnown RBP16.66■□□□□ 0.26
COL13A1-205ENST00000398978 SRP19P09132 144 aaKnown RBP16.66■□□□□ 0.26
COL13A1-205ENST00000398978 VDAC1P21796 283 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 ID3Q02535 119 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 DCAF12Q5T6F0 453 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 PCSK4Q6UW60 755 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 CMTM1Q8IZ96 169 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 MRPL30Q8TCC3 161 aaKnown RBP16.66■□□□□ 0.26
COL13A1-205ENST00000398978 SPIN2AQ99865 258 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 SPIN2BQ9BPZ2 258 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 LOXL2Q9Y4K0 774 aa16.66■□□□□ 0.26
COL13A1-205ENST00000398978 TRAV20A0A0B4J274 112 aa16.65■□□□□ 0.26
COL13A1-205ENST00000398978 HSPA12AO43301 675 aa16.65■□□□□ 0.26
COL13A1-205ENST00000398978 CA6P23280 308 aa16.65■□□□□ 0.26
COL13A1-205ENST00000398978 DLK1P80370 383 aa16.65■□□□□ 0.26
COL13A1-205ENST00000398978 ICAM4Q14773 271 aa16.65■□□□□ 0.26
COL13A1-205ENST00000398978 CFAP47Q6ZTR5 3102 aa16.65■□□□□ 0.26
COL13A1-205ENST00000398978 UCP1P25874 307 aa16.65■□□□□ 0.26
COL13A1-205ENST00000398978 MPV17LQ2QL34 196 aa16.65■□□□□ 0.26
COL13A1-205ENST00000398978 ZNF429Q86V71 674 aa16.65■□□□□ 0.26
COL13A1-205ENST00000398978 GNG13Q9P2W3 67 aa16.65■□□□□ 0.26
COL13A1-205ENST00000398978 MIOXQ9UGB7 285 aa16.65■□□□□ 0.26
COL13A1-205ENST00000398978 ATP23Q9Y6H3 246 aa16.65■□□□□ 0.26
COL13A1-205ENST00000398978 TGIF2-C20orf24A0A0A6YYL0 155 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 TRAV24A0A0B4J272 114 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 ZFP92A6NM28 416 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 CD300LBA8K4G0 201 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 IGHV2-5P01817 119 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 SRPXP78539 464 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 PDZD11Q5EBL8 140 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 LCN15Q6UWW0 184 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 NUFIP2Q7Z417 695 aaKnown RBP16.64■□□□□ 0.25
COL13A1-205ENST00000398978 ZNF295-AS1Q8N0V1 137 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 HIST1H2AAQ96QV6 131 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 TUBA4BQ9H853 241 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 USF3Q68DE3 2245 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 SCAF4O95104 1147 aaKnown RBP16.64■□□□□ 0.25
COL13A1-205ENST00000398978 SLC34A2O95436 690 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 METTL15P1P0C7V9 234 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 LHX2P50458 406 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 RPL23AP62750 156 aaKnown RBP16.64■□□□□ 0.25
COL13A1-205ENST00000398978 FAM53AQ6NSI3 398 aaPredicted RBP16.64■□□□□ 0.25
COL13A1-205ENST00000398978 FAM185AQ8N0U4 392 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 LFNGQ8NES3 379 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 WSB1Q9Y6I7 421 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 TUSC2O75896 110 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 NDUFA6P56556 154 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 KIAA0141Q14154 515 aaPredicted RBP16.64■□□□□ 0.25
COL13A1-205ENST00000398978 ZNF674Q2M3X9 581 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 Q8WTZ3 238 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 PRSS50Q9UI38 385 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 RNF115Q9Y4L5 304 aa16.64■□□□□ 0.25
COL13A1-205ENST00000398978 RBM7Q9Y580 266 aaKnown RBP16.64■□□□□ 0.25
COL13A1-205ENST00000398978 SIRPB1O00241 398 aa16.63■□□□□ 0.25
COL13A1-205ENST00000398978 NEURL1O76050 574 aa16.63■□□□□ 0.25
COL13A1-205ENST00000398978 ERVFRD-1P60508 538 aa16.63■□□□□ 0.25
COL13A1-205ENST00000398978 C6orf15Q6UXA7 325 aaPredicted RBP16.63■□□□□ 0.25
COL13A1-205ENST00000398978 OR2M7Q8NG81 312 aa16.63■□□□□ 0.25
COL13A1-205ENST00000398978 MUCL1Q96DR8 90 aa16.63■□□□□ 0.25
COL13A1-205ENST00000398978 METTL1Q9UBP6 276 aaKnown RBP16.63■□□□□ 0.25
COL13A1-205ENST00000398978 AP4M1O00189 453 aa16.63■□□□□ 0.25
COL13A1-205ENST00000398978 SERPINE2P07093 398 aa16.63■□□□□ 0.25
COL13A1-205ENST00000398978 F2RP25116 425 aa16.63■□□□□ 0.25
COL13A1-205ENST00000398978 CLDN18P56856 261 aa16.63■□□□□ 0.25
COL13A1-205ENST00000398978 CDPF1Q6NVV7 123 aa16.63■□□□□ 0.25
COL13A1-205ENST00000398978 OR10J5Q8NHC4 309 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms