RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 VWA8A3KMH1 1905 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 BRD4O60885 1362 aaPredicted RBP1.27□□□□□ -2.21
CD47-203ENST00000398258 RAD50Q92878 1312 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 TRBV24-1A0A075B6N3 115 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 IGKV3D-11A0A0A0MRZ8 115 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 C9J4A7 227 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 F8VZ95 297 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 J3QLI3 93 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 NDUFS6O75380 124 aaKnown RBP1.27□□□□□ -2.21
CD47-203ENST00000398258 SNAP29O95721 258 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 IGHMP01871 453 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 IGKV4-1P06312 121 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 PSKH1P11801 424 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 ZNF708P17019 499 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 ZNF3P17036 446 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 SYT1P21579 422 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 PSMB6P28072 239 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 EVI2BP34910 448 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 MP68P56378 58 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 ZNF141Q15928 474 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 BCL2A1Q16548 175 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 EXOC3L4Q17RC7 722 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 LRRC26Q2I0M4 334 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 KRTAP6-3Q3LI67 103 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 HES3Q5TGS1 186 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 NIPAL1Q6NVV3 410 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 OLIG3Q7RTU3 272 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 VN1R4Q7Z5H5 301 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 LYPD6Q86Y78 171 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 EIF4E3Q8N5X7 224 aaKnown RBP1.27□□□□□ -2.21
CD47-203ENST00000398258 OR7G1Q8NGA0 311 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 CMTM2Q8TAZ6 248 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 TRIB3Q96RU7 358 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 ZNF251Q9BRH9 671 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 TSSK6Q9BXA6 273 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 ULBP1Q9BZM6 244 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 CHMP4BQ9H444 224 aaKnown RBP1.27□□□□□ -2.21
CD47-203ENST00000398258 C1orf109Q9NX04 203 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 OR5V1Q9UGF6 321 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 RPUSD1Q9UJJ7 312 aaKnown RBP1.27□□□□□ -2.21
CD47-203ENST00000398258 MTCH2Q9Y6C9 303 aa1.27□□□□□ -2.21
CD47-203ENST00000398258 CLUHO75153 1309 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 IGLV10-54A0A075B6I4 117 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 A0A0B4J2C4 111 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 F5H5K5 113 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 GOLGA8RI6L899 631 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 LECT2O14960 151 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 TOX3O15405 576 aaPredicted RBP1.26□□□□□ -2.21
CD47-203ENST00000398258 DENRO43583 198 aaKnown RBP1.26□□□□□ -2.21
CD47-203ENST00000398258 PSCAO43653 123 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 SYNGR2O43760 224 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 MPZL2O60487 215 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 PSIP1O75475 530 aaKnown RBP1.26□□□□□ -2.21
CD47-203ENST00000398258 CDS2O95674 445 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 RAB36O95755 333 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 CTSEP14091 401 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 ATF1P18846 271 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 PRPS1L1P21108 318 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 HSPA13P48723 471 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 DLX6P56179 175 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 RAB8AP61006 207 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 SKP2Q13309 424 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 PMS2P3Q13401 168 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 ANGPT1Q15389 498 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 C10orf91Q5T1B1 145 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 SMARCD3Q6STE5 483 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 CRLF3Q8IUI8 442 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 OR52E4Q8NGH9 312 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 OR4P4Q8NGL7 312 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 ZCCHC13Q8WW36 166 aaKnown RBP1.26□□□□□ -2.21
CD47-203ENST00000398258 RAD51AP1Q96B01 352 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 OTUB2Q96DC9 234 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 TMEM56Q96MV1 263 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 TRNT1Q96Q11 434 aaKnown RBP1.26□□□□□ -2.21
CD47-203ENST00000398258 METTL17Q9H7H0 456 aaPredicted RBP1.26□□□□□ -2.21
CD47-203ENST00000398258 ZNF286AQ9HBT8 521 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 UBQLN4Q9NRR5 601 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 BTRCQ9Y297 605 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 CARHSP1Q9Y2V2 147 aaKnown RBP1.26□□□□□ -2.21
CD47-203ENST00000398258 U3KQK5 164 aa1.26□□□□□ -2.21
CD47-203ENST00000398258 EIF4G1Q04637 1599 aaKnown RBP1.25□□□□□ -2.21
CD47-203ENST00000398258 CEP170Q5SW79 1584 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 SDK2Q58EX2 2172 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 IGKV1-12A0A0C4DH73 117 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 A0A1W2PNM2 257 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 TRPC5OSA6NMA1 111 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 EFCAB9A8MZ26 197 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 H3BSA7 217 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 AQP9O43315 295 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 CYTH3O43739 400 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 SH2D1AO60880 128 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 IGKV1D-12P01611 117 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 GYPCP04921 128 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 CRATP43155 626 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 RAB25P57735 213 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 GTF2BQ00403 316 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 MEF2BQ02080 365 aaPredicted RBP1.25□□□□□ -2.21
CD47-203ENST00000398258 TNFRSF9Q07011 255 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 BRD3OSQ6XYD6 125 aa1.25□□□□□ -2.21
CD47-203ENST00000398258 OR5L1Q8NGL2 311 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms