RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CSMD1Q96PZ7 3565 aa10.88□□□□□ -0.67
USP44-202ENST00000393091 ITPR3Q14573 2671 aa10.88□□□□□ -0.67
USP44-202ENST00000393091 hCG_1809904A0A1W2PP81 198 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 A0A1W2PPE2 198 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 A0A1W2PR64 198 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 A0A1W2PRV1 198 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 TRDCB7Z8K6 153 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 LPLP06858 475 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 GNB3P16520 340 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 CNIH2Q6PI25 160 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 AKIP1Q9NQ31 210 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 GABARAPH6UMI1 98 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 IGHV1-8P0DP01 117 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 NDUFB7P17568 137 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 ZNF137PP52743 207 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 GMFBP60983 142 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 HLA-DRB3P79483 266 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 LCN2P80188 198 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 ZNF45Q02386 682 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 ATXN7L3Q14CW9 347 aaPredicted RBP10.87□□□□□ -0.67
USP44-202ENST00000393091 ZNF439Q8NDP4 499 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 BEND2Q8NDZ0 799 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 CMSS1Q9BQ75 279 aaKnown RBP10.87□□□□□ -0.67
USP44-202ENST00000393091 CALYQ9NYX4 217 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 IDI2-AS1Q9NZ38 188 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 SLC23A1Q9UHI7 598 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 JPT1Q9UK76 154 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 NAV2Q8IVL1 2488 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 TBPP20226 339 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 KIR2DS4P43632 304 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 ERVFRD-1P60508 538 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 KIR2DS1Q14954 304 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 SMIM4Q8WVI0 70 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 MMP26Q9NRE1 261 aa10.87□□□□□ -0.67
USP44-202ENST00000393091 PHF1O43189 567 aaPredicted RBP10.86□□□□□ -0.67
USP44-202ENST00000393091 YPEL1O60688 119 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 CD3GP09693 182 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 CTXN2P0C2S0 81 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 FPR2P25090 351 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 GUCA2AQ02747 115 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 OLFML2AQ68BL7 652 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 YPEL2Q96QA6 119 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 GHITMQ9H3K2 345 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 HIF1ANQ9NWT6 349 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 EXTL2Q9UBQ6 330 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 TRAV18A0A075B6X5 111 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 ZNF16P17020 682 aaPredicted RBP10.86□□□□□ -0.67
USP44-202ENST00000393091 RCVRNP35243 200 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 TALDO1P37837 337 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 SNU13P55769 128 aaKnown RBP10.86□□□□□ -0.67
USP44-202ENST00000393091 MIDNQ504T8 468 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 FAM71F2Q6NXP2 309 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 MFSD4AQ8N468 514 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 PHF21AQ96BD5 680 aa10.86□□□□□ -0.67
USP44-202ENST00000393091 UBE2QL1A1L167 161 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 C12orf77C9JDV5 145 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 HOXB4P17483 251 aaPredicted RBP10.85□□□□□ -0.67
USP44-202ENST00000393091 UBE2E1P51965 193 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 SCN1BQ07699 218 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 DCAF12L2Q5VW00 463 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 KIRREL1Q96J84 757 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 DCUN1D5Q9BTE7 237 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 MTFP1Q9UDX5 166 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 TRBV6-7A0A0A0MS04 114 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 CD74P04233 296 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 PRSS3P35030 304 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 S100ZQ8WXG8 99 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 ABHD1Q96SE0 405 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 NARFLQ9H6Q4 476 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 ITGB1BP2Q9UKP3 347 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 KCNS2Q9ULS6 477 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 TBL2Q9Y4P3 447 aaKnown RBP10.85□□□□□ -0.67
USP44-202ENST00000393091 MEIKINA0A087WXM9 373 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 S100A5P33763 92 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 ZNF79Q15937 498 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 ACTBL2Q562R1 376 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 NKAPLQ5M9Q1 402 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 C1orf229Q6ZS94 237 aaPredicted RBP10.85□□□□□ -0.67
USP44-202ENST00000393091 AJUBAQ96IF1 538 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 GFOD1Q9NXC2 390 aa10.85□□□□□ -0.67
USP44-202ENST00000393091 LY6LH3BQJ8 138 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 IGLV1-47P01700 117 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 AANATQ16613 207 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 GDPD1Q8N9F7 314 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 TMEM133Q9H2Q1 129 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 AUP1Q9Y679 476 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 ARID1AO14497 2285 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 TMEM235A6NFC5 223 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 LY6G6DO95868 133 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 METTL11BQ5VVY1 283 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 ZNF626Q68DY1 528 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 TMEM229BQ8NBD8 167 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 C6orf62Q9GZU0 229 aaPredicted RBP10.84□□□□□ -0.67
USP44-202ENST00000393091 KCNIP1Q9NZI2 227 aa10.84□□□□□ -0.67
USP44-202ENST00000393091 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.84□□□□□ -0.67
USP44-202ENST00000393091 SPINT2O43291 252 aa10.83□□□□□ -0.68
USP44-202ENST00000393091 TUSC2O75896 110 aa10.83□□□□□ -0.68
USP44-202ENST00000393091 TOX4O94842 621 aa10.83□□□□□ -0.68
USP44-202ENST00000393091 EDDM3BP56851 147 aa10.83□□□□□ -0.68
USP44-202ENST00000393091 GNG2P59768 71 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms