RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 NECAP1Q8NC96 275 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 LINC00301Q8NCQ3 95 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 BPIFB6Q8NFQ5 453 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 OR5B17Q8NGF7 314 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 OR5J2Q8NH18 312 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 RNASEH2CQ8TDP1 164 aaKnown RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 RNF133Q8WVZ7 376 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 C11orf40Q8WZ69 217 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 AP3S1Q92572 193 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 S100PBPQ96BU1 408 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 C8orf44Q96CB5 159 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 CMBLQ96DG6 245 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 SEH1LQ96EE3 360 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 BMFQ96LC9 184 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 PRRC1Q96M27 445 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 RBP7Q96R05 134 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 PLA2G2FQ9BZM2 168 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 NKX6-2Q9C056 277 aaPredicted RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 CHST5Q9GZS9 411 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 SRRQ9GZT4 340 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 PARP12Q9H0J9 701 aaKnown RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 PCBD2Q9H0N5 130 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 RAB1BQ9H0U4 201 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 PORCNQ9H237 461 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 SLC38A1Q9H2H9 487 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 IFI27L2Q9H2X8 130 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 TRABDQ9H4I3 376 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 FBXO44Q9H4M3 255 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 RGCCQ9H4X1 137 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 RPP21Q9H633 154 aaKnown RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 TMEM38AQ9H6F2 299 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 NOX3Q9HBY0 568 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 ISYNA1Q9NPH2 558 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 C1orf109Q9NX04 203 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 RASL12Q9NYN1 266 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 OPTCQ9UBM4 332 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 DHCR7Q9UBM7 475 aaKnown RBP1.95□□□□□ -2.1
PTPRC-205ENST00000391970 OPN4Q9UHM6 478 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 RWDD2AQ9UIY3 292 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 KLK12Q9UKR0 248 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 TBC1D24Q9ULP9 559 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 POMPQ9Y244 141 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 SLC17A4Q9Y2C5 497 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 RHBDD3Q9Y3P4 386 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 KCNE3Q9Y6H6 103 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 NACAE9PAV3 2078 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 STRCP1A6NGW2 1772 aa1.95□□□□□ -2.1
PTPRC-205ENST00000391970 PXDNQ92626 1479 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CD163L1Q9NR16 1453 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CCDC88AQ3V6T2 1871 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ASTN1O14525 1302 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF638Q14966 1978 aaKnown RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 AFDNP55196 1824 aaKnown RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 IGHV5-51A0A0C4DH38 117 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 A0A1B0GTI1 187 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 A0A1B0GV72 72 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 A0A1W2PQL4 384 aaPredicted RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 LYRM9A8MSI8 78 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ANKRD63C9JTQ0 380 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 RNASEK-C17orf49H0YIS7 233 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 KLRC4-KLRK1H3BQV0 150 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 M0QZ92 97 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 BHLHE40O14503 412 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ORC5O43913 435 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 DNAJB6O75190 326 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CLDN11O75508 207 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 RP2O75695 350 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 AQP8O94778 261 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ATG12O94817 140 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 TNFSF15O95150 251 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 RPN2P04844 631 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 C8GP07360 202 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 DCNP07585 359 aaKnown RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ERCC1P07992 297 aaPredicted RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF806P0C7X5 589 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 TLX1NBP0CAT3 122 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CT45A6P0DMU7 189 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CT45A5P0DMU8 189 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CT45A7P0DMV0 189 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 OR5H8P0DN80 308 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 GTF2F2P13984 249 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 NQO2P16083 231 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ZNF823P16415 610 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CSNK2A2P19784 350 aaPredicted RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 RAB3BP20337 219 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 MAGP20916 626 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 F2RP25116 425 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 PSMB5P28074 263 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 CD200P41217 278 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 UQCRFS1P47985 274 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 IDH2P48735 452 aaKnown RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 ACOT2P49753 483 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 AKR1D1P51857 326 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 NDUFA8P51970 172 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 RND2P52198 227 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 TAS2R39P59534 338 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 RAB2AP61019 212 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 RAB5BP61020 215 aa1.94□□□□□ -2.1
PTPRC-205ENST00000391970 STXBP1P61764 594 aaKnown RBP1.94□□□□□ -2.1
PTPRC-205ENST00000391970 IL5RAQ01344 420 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms