RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 DAPL1A0PJW8 107 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 NCBP2LA6PVI3 153 aaKnown RBP7.26□□□□□ -1.25
CNOT9-202ENST00000295701 ZNF736B4DX44 427 aaPredicted RBP7.26□□□□□ -1.25
CNOT9-202ENST00000295701 SLC16A6O15403 523 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 IL1AP01583 271 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 HCKP08631 526 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 FASP25445 335 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 GPR12P47775 334 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 RAB7AP51149 207 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 ALKBH1Q13686 389 aaKnown RBP7.26□□□□□ -1.25
CNOT9-202ENST00000295701 EBI3Q14213 229 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 TEX38Q6PEX7 206 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 LHFPL3Q86UP9 236 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 SATL1Q86VE3 508 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 OR8H3Q8N146 312 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 ZNF565Q8N9K5 539 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 Q8N9W7 124 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 OR51A2Q8NGJ7 313 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 CNIH3Q8TBE1 160 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 RNFT2Q96EX2 444 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 C4orf36Q96KX1 117 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 HSPB9Q9BQS6 159 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 LINC00574Q9H8X3 128 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 ISG20L2Q9H9L3 353 aaKnown RBP7.26□□□□□ -1.25
CNOT9-202ENST00000295701 PLSCR3Q9NRY6 295 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 STAB2Q8WWQ8 2551 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 CSMD3Q7Z407 3707 aa7.26□□□□□ -1.25
CNOT9-202ENST00000295701 HYDINQ4G0P3 5121 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 IGHV3-43A0A0B4J1X8 118 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 SAC3D1A6NKF1 404 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 SEC14L6B5MCN3 397 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 E9PI62 339 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 CCRL2O00421 344 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 HSD17B6O14756 317 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 SLC31A2O15432 143 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 RAMP3O60896 148 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 IGHV3-43DP0DP04 118 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 C21orf33P30042 268 aaPredicted RBP7.25□□□□□ -1.25
CNOT9-202ENST00000295701 MTNR1BP49286 362 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 CCR9P51686 369 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 TMED1Q13445 227 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 GPR50Q13585 617 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 KIR2DS1Q14954 304 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 PNLIPRP3Q17RR3 467 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 C9orf66Q5T8R8 295 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 FOXRED2Q8IWF2 684 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 COMMD1Q8N668 190 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 Q8N6K4 173 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 OR5M8Q8NGP6 311 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 OR10X1Q8NGY0 326 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 HAVCR2Q8TDQ0 301 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 CCDC107Q8WV48 283 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 RNF141Q8WVD5 230 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 CYYR1Q96J86 154 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 PDCD1LG2Q9BQ51 273 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 GABARAPL3Q9BY60 117 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 KRTAP4-9Q9BYQ8 210 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 BARHL1Q9BZE3 327 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 ABCG5Q9H222 651 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 RHOFQ9HBH0 211 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 PCDHB16Q9NRJ7 776 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 AP4S1Q9Y587 144 aa7.25□□□□□ -1.25
CNOT9-202ENST00000295701 AP4M1O00189 453 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 GABRPO00591 440 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 SULT1B1O43704 296 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 ZFPL1O95159 310 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 CDRT1O95170 752 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 HTR3BO95264 441 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 GAPDHP04406 335 aaKnown RBP7.24□□□□□ -1.25
CNOT9-202ENST00000295701 DBTP11182 482 aaKnown RBP7.24□□□□□ -1.25
CNOT9-202ENST00000295701 SLC6A1P30531 599 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 CDX1P47902 265 aaPredicted RBP7.24□□□□□ -1.25
CNOT9-202ENST00000295701 F2RL1P55085 397 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 CFHR3Q02985 330 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 ZNF816Q0VGE8 651 aaPredicted RBP7.24□□□□□ -1.25
CNOT9-202ENST00000295701 DCTN2Q13561 401 aaKnown RBP7.24□□□□□ -1.25
CNOT9-202ENST00000295701 ZIK1Q3SY52 487 aaPredicted RBP7.24□□□□□ -1.25
CNOT9-202ENST00000295701 ZNF260Q3ZCT1 412 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 CXorf66Q5JRM2 361 aaPredicted RBP7.24□□□□□ -1.25
CNOT9-202ENST00000295701 LCE4AQ5TA78 99 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 ELP2Q6IA86 826 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 KCTD20Q7Z5Y7 419 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 C5orf24Q7Z6I8 188 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 TGIF2LXQ8IUE1 241 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 SBSPONQ8IVN8 264 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 SERPINA12Q8IW75 414 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 SUMF2Q8NBJ7 301 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 TNFAIP8L1Q8WVP5 186 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 RFKQ969G6 155 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 LGALS12Q96DT0 336 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 DPCDQ9BVM2 203 aaPredicted RBP7.24□□□□□ -1.25
CNOT9-202ENST00000295701 NCOR1P1Q9H4R4 102 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 OAZ3Q9UMX2 235 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 EXOGQ9Y2C4 368 aaKnown RBP7.24□□□□□ -1.25
CNOT9-202ENST00000295701 BIRC6Q9NR09 4857 aa7.24□□□□□ -1.25
CNOT9-202ENST00000295701 C3orf84H3BNL1 204 aa7.23□□□□□ -1.25
CNOT9-202ENST00000295701 C15orf65H3BRN8 121 aa7.23□□□□□ -1.25
CNOT9-202ENST00000295701 LY86O95711 162 aa7.23□□□□□ -1.25
CNOT9-202ENST00000295701 SOX2P48431 317 aa7.23□□□□□ -1.25
CNOT9-202ENST00000295701 GTF2A1P52655 376 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms