RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 CEP250Q9BV73 2442 aa13.9□□□□□ -0.18
SNCAIP-202ENST00000261368 CD200P41217 278 aa13.9□□□□□ -0.18
SNCAIP-202ENST00000261368 GGACTQ9BVM4 153 aa13.9□□□□□ -0.18
SNCAIP-202ENST00000261368 KIAA1456Q9P272 454 aa13.9□□□□□ -0.18
SNCAIP-202ENST00000261368 DEFA6Q01524 100 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 IL11RAQ14626 422 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 TUSC5Q8IXB3 177 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 Q8WTZ3 238 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 GPR61Q9BZJ8 451 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 PROK2Q9HC23 129 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 ZMAT5Q9UDW3 170 aaKnown RBP13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 CLDN1O95832 211 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 FOXG1P55316 489 aaPredicted RBP13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 ZNF880Q6PDB4 577 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 RPUSD4Q96CM3 377 aaKnown RBP13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 PRO1933Q9H354 126 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 ARHGAP21Q5T5U3 1957 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 DFFBO76075 338 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 SRP19P09132 144 aaKnown RBP13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 CXCL1P09341 107 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 MMP9P14780 707 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 ZNF383Q8NA42 475 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 KCNE4Q8WWG9 221 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 PSENENQ9NZ42 101 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 GAB2Q9UQC2 676 aa13.89□□□□□ -0.19
SNCAIP-202ENST00000261368 TMEM50AO95807 157 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 HIST1H3AP68431 136 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 EIF3IQ13347 325 aaKnown RBP13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 THOC3Q96J01 351 aaKnown RBP13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 DEGS1O15121 323 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 KLF7O75840 302 aaPredicted RBP13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 CA6P23280 308 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 HLA-DRB3P79483 266 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 CLDN23Q96B33 292 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 ATP5SQ99766 215 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 WDR54Q9H977 334 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 Q9N2K0 584 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 UCP3P55916 312 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 GFI1BQ5VTD9 330 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 LRTM2Q8N967 370 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 TAAR9Q96RI9 348 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 CABLES2Q9BTV7 478 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 ARV1Q9H2C2 271 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 ZNF552Q9H707 407 aaPredicted RBP13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 TUBA4BQ9H853 241 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 PLA2G3Q9NZ20 509 aa13.88□□□□□ -0.19
SNCAIP-202ENST00000261368 ZNF808Q8N4W9 903 aaPredicted RBP13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 M1APQ8TC57 530 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 RNF138Q8WVD3 245 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 FAM210BQ96KR6 192 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 CRIM1Q9NZV1 1036 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 UBE2L5PA0A1B0GUS4 154 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 PGLYRP1O75594 196 aaPredicted RBP13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 HIKESHIQ53FT3 197 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 SPNS3Q6ZMD2 512 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 MAFAQ8NHW3 353 aaPredicted RBP13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 LYPD6BQ8NI32 183 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 HPSE2Q8WWQ2 592 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 GPR146Q96CH1 333 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 DECR2Q9NUI1 292 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 SLC39A9Q9NUM3 307 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 MTCH1Q9NZJ7 389 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 BTBD17A6NE02 478 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 ZNF716A6NP11 495 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 BMP5P22003 454 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 APLNRP35414 380 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 TRIM61Q5EBN2 209 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 HEPN1Q6WQI6 88 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 C1orf87Q8N0U7 546 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 SNX22Q96L94 193 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 ZNF391Q9UJN7 358 aa13.87□□□□□ -0.19
SNCAIP-202ENST00000261368 ERVFRD-1P60508 538 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 ICAM4Q14773 271 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 OR8B8Q15620 311 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 ABHD17BQ5VST6 288 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 HES7Q9BYE0 225 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 CELA3AP09093 270 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 F2RP25116 425 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 ZXDAP98168 799 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 SPSB3Q6PJ21 355 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 Q6ZPA2 131 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 LHX4Q969G2 390 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 MUCL1Q96DR8 90 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 RHOVQ96L33 236 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 EGLN1Q9GZT9 426 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 RPRMQ9NS64 109 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 GFOD1Q9NXC2 390 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 OR1A1Q9P1Q5 309 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 BOKQ9UMX3 212 aaPredicted RBP13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 FGF5P12034 268 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 TAS2R30P59541 319 aa13.86□□□□□ -0.19
SNCAIP-202ENST00000261368 ARGFXA6NJG6 315 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 GRPP07492 148 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 IDH3GP51553 393 aaPredicted RBP13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 FGF12P61328 243 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 PMP22Q01453 160 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 IL24Q13007 206 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 USF2Q15853 346 aaPredicted RBP13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 LTC4SQ16873 150 aa13.85□□□□□ -0.19
SNCAIP-202ENST00000261368 APH1AQ96BI3 265 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms