RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 P01804 111 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 H2-K1P01901 369 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Lyz2P08905 148 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Rasd2P63032 266 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 UbdP63072 162 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Stx4P70452 298 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Nr4a2Q06219 598 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr1340Q3KPC7 315 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 XkrxQ5GH68 449 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Diras2Q5PR73 199 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Sntb2Q61235 520 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Lcn3Q62471 182 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Znf260Q62513 407 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm21093Q6GQS8 569 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Zfp82Q6P9Y7 530 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Zfp3Q8BLB0 497 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Kbtbd11Q8BNW9 633 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Pqlc2Q8C4N4 293 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gltpd2Q8K0R6 321 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Alg12Q8VDB2 486 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr361Q8VF16 322 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr27Q9EQ90 311 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Elp4Q9ER73 422 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gnpnat1Q9JK38 184 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Anxa10Q9QZ10 324 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Nubp2Q9R061 275 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Hebp2Q9WU63 205 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gstz1Q9WVL0 216 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Tmem156A0A1D5RLR8 321 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 SiglechB7ZMQ6 332 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr623E9Q382 317 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Atpif1O35143 106 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 DffbO54788 344 aaKnown RBP7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Tbx15O70306 602 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Slc28a2O88627 660 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 P04945 108 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 SrcP05480 541 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Zfp58P16372 489 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Hsd11b1P50172 292 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Q0VG62 139 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Xlr4cQ3TKR2 215 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Tmprss12Q3V0Q7 336 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Fbxw16Q497Z0 464 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 PmelQ60696 626 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Klk1b24Q61754 263 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Spock1Q62288 442 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Lhfpl2Q8BGA2 222 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Fam234bQ8BYI8 624 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Klf17Q8CFA7 341 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Mbnl3Q8R003 342 aaKnown RBP7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Vmn1r233Q8R294 319 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Aqp3Q8R2N1 292 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Eef1akmt1Q9CY45 214 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ccdc167Q9D162 97 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Fancd2osQ9D4K4 178 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ndufa9Q9DC69 377 aaKnown RBP7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Vmn1r41Q9EQ44 310 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Barx1Q9ER42 254 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Xlr4bQ9JJQ7 215 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 SclyQ9JLI6 432 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Chd8Q09XV5 2582 aaKnown RBP7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm5519D3Z175 170 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr64F8VPZ8 307 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Plscr5J3QM92 274 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ntsr1O88319 424 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 GzmeP08884 248 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Cd1d1P11609 336 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Cd1d2P11610 336 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 InmtP40936 264 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 PtgfrP43117 366 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 St6galnac2P70277 373 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Fam71f1Q3UZD7 341 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Cnot4Q8BT14 575 aaKnown RBP7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ube3dQ8BX13 368 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 FarsaQ8C0C7 508 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Rft1Q8C3B8 541 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Wipf1Q8K1I7 493 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Tmem144Q8VEH0 348 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Slc33a1Q99J27 550 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Spsb1Q9D5L7 273 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ndufb8Q9D6J5 186 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ssmem1Q9D9Y8 244 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ropn1lQ9EQ00 218 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Polg2Q9QZM2 459 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Tet1Q3URK3 2007 aaKnown RBP7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Igkv14-100A0A0G2JG36 117 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Hoxb1P17919 297 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ascl1Q02067 231 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Q3UZV7 1028 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Vmn1r223Q5SSA0 361 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Bhlhe23Q8BGW3 223 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Rcc1Q8VE37 421 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ccdc115Q8VE99 180 aaKnown RBP7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr1453Q8VFX0 307 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Yif1aQ91XB7 293 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 2210010C04RikQ9CPN9 247 aaKnown RBP7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Trappc6bQ9D289 158 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Wbp2nlQ9D529 359 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 Mbd3l1Q9D9H3 186 aa7.47□□□□□ -1.21
Trim39-201ENSMUST00000042717 1700025F22RikQ9D9Y7 111 aa7.47□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms