RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Arl14epQ8BIX3 276 aa14.8□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Reep4Q8K072 257 aa14.8□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Lin28aQ8K3Y3 209 aaKnown RBP14.8□□□□□ -0.04
Ctcf-201ENSMUST00000005841 DutQ8VCG1 200 aaKnown RBP14.8□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Pofut1Q91ZW2 393 aa14.8□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Znf281Q99LI5 893 aa14.8□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Izumo1Q9D9J7 397 aa14.8□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Gnpnat1Q9JK38 184 aa14.8□□□□□ -0.04
Ctcf-201ENSMUST00000005841 BC117090L7N257 96 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 B3gat2P59270 324 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Olfr1269Q8VEZ2 309 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Ms4a4dQ99N05 225 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 SdhbQ9CQA3 282 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Mrpl14Q9D1I6 145 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Mcts1Q9DB27 181 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Zfp944E9PUS4 492 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Prss39O70169 367 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Zfp2P08043 459 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Sod2P09671 222 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Ca6P18761 317 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 GrprP21729 384 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Hsd17b8P50171 259 aaKnown RBP14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Rab2aP53994 212 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 H2-T22Q31615 379 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Nol4lQ6DIB4 494 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 CyrenQ8BHZ5 157 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Actr1bQ8R5C5 376 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Olfr1099Q8VG37 312 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 TirapQ99JY1 241 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Q9D4G1 230 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Prr19B2RW88 366 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Amy2a1E9PV85 245 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Prpmp5E9PXN1 296 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Nanos2P60322 136 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Zfp729aQ4QQP3 973 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Gm12253Q5NC48 229 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Cd200r5Q8BTP3 270 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Samd7Q8C8Y5 445 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Lyrm2Q8R033 88 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 PacrgQ9DAK2 241 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Olfr154Q9QY00 318 aa14.79□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Olfr199F6ZUS0 308 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Saa2P05367 122 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Egr3P43300 387 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Vmn1r15Q14C10 299 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Defb8Q91V82 60 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Fn3kQ9ER35 309 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 SclyQ9JLI6 432 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Pmaip1Q9JM54 103 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Bex3Q9WTZ9 124 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Pfdn5Q9WU28 154 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Gm3854A0A1B0GSS6 495 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Gm14444A2ARW3 426 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Skint8A7XV07 398 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Gm10638F6QEG2 257 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Vmn1r170K7N6W9 304 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 GbaP17439 515 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 CryzP47199 331 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Fgf13P70377 245 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Wfdc5Q4KXB6 126 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 CmahQ61419 577 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 ErasQ7TN89 227 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Olfr305Q7TS02 319 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Negr1Q80Z24 348 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Actrt3Q8BXF8 369 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Olfr24Q8VFM9 313 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Vmn1r172Q9EPS4 313 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Oc90Q9Z0L3 485 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Rap1aP62835 184 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Il18P70380 192 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 JPT1P97825 154 aaKnown RBP14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Olfr1427Q8VFU9 311 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Rwdd3Q8VIL2 267 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Pot1Q91WC1 640 aaKnown RBP14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Mrpl27Q99N92 148 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 2210010C04RikQ9CPN9 247 aaKnown RBP14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 AspdhQ9DCQ2 287 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Kiaa0141Q9DCV6 510 aa14.78□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Ighv6-4A0A0A6YX19 119 aa14.77□□□□□ -0.04
Ctcf-201ENSMUST00000005841 CenpfE9Q3P4 2997 aaKnown RBP14.77□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Ankrd66J3QNN4 192 aa14.77□□□□□ -0.04
Ctcf-201ENSMUST00000005841 SellP18337 372 aa14.77□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Olfr18Q0VAX9 331 aa14.77□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Vmn1r66Q8K4I0 310 aa14.77□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Vmn1r8Q8R2C2 303 aa14.77□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Nt5mQ8VCE6 220 aa14.77□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Cd209cQ91ZW9 178 aa14.77□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Polr2hQ923G2 150 aa14.77□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Riox1Q9JJF3 603 aa14.77□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Pex14Q9R0A0 376 aa14.77□□□□□ -0.04
Ctcf-201ENSMUST00000005841 Gm21976J3QNN2 249 aa14.77□□□□□ -0.05
Ctcf-201ENSMUST00000005841 Ccl9P51670 122 aa14.77□□□□□ -0.05
Ctcf-201ENSMUST00000005841 5730522E02RikQ5SP45 163 aa14.77□□□□□ -0.05
Ctcf-201ENSMUST00000005841 Olfr1385Q7TQT1 309 aa14.77□□□□□ -0.05
Ctcf-201ENSMUST00000005841 Olfr506Q7TRU6 314 aa14.77□□□□□ -0.05
Ctcf-201ENSMUST00000005841 Q8C3I9 435 aa14.77□□□□□ -0.05
Ctcf-201ENSMUST00000005841 MrgprgQ91ZB5 289 aa14.77□□□□□ -0.05
Ctcf-201ENSMUST00000005841 Rnd2Q9QYM5 227 aa14.77□□□□□ -0.05
Ctcf-201ENSMUST00000005841 Amy1P00687 511 aa14.77□□□□□ -0.05
Ctcf-201ENSMUST00000005841 LcatP16301 438 aa14.77□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms