RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 SigirrQ9JLZ8 409 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 C1galt1c1Q9JMG2 316 aa16.41■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr430E9Q5F1 317 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gpm6aP35802 278 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Hist1h1dP43277 221 aaKnown RBP16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Hist1h3aP68433 136 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Hist1h3bP84228 136 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 CtrcQ3SYP2 268 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Tsen54Q8C2A2 525 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Chrnb4Q8R493 495 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Calhm2Q8VEC4 323 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr796Q8VGJ1 310 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Lpcat3Q91V01 487 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Dnajc24Q91ZF0 196 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Mrpl28Q9D1B9 257 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Prr32A2AFE9 284 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm498D3YYH9 372 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm8225D3Z536 292 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Nme1P15532 152 aaKnown RBP16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 DaoP18894 345 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gabrg3P27681 467 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Nkain2Q4PNJ2 208 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gpr135Q7TQP2 457 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Vmn1r220Q8R272 298 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Znf385aQ8VD12 386 aaKnown RBP16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Olfr794Q8VF26 320 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Rbm39Q8VH51 530 aaKnown RBP16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Hsbp1Q9CQZ1 76 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 MrnipQ9D1F5 335 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 ChrdQ9Z0E2 948 aa16.4■□□□□ 0.22
Shkbp1-201ENSMUST00000003857 Gm4131A0A140LJ24 318 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Vmn1r5B2RQT2 315 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Cd7P50283 210 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Gabrr1P56475 480 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Tmem71Q149F5 287 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Gpr55Q3UJF0 327 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Hs3st6Q5GFD5 342 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Olfr876Q7TRE4 310 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Zbtb49Q8BXX2 756 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Tceal3Q8R0A5 200 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Vmn1r217Q8R270 298 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Mfsd6lQ8R3N2 586 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Olfr460Q8VF31 314 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Rtn4rQ99PI8 473 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 2900055J20RikQ9D6G3 140 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Sec11cQ9D8V7 192 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Tceal6Q9DB24 200 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Dtd1Q9DD18 209 aaKnown RBP16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Olfr957Q9EQB7 311 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 RhcgQ9QXP0 498 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Eif2s3yQ9Z0N2 472 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Cldn10Q9Z0S6 231 aa16.39■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Gm13547A2ARC0 163 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Cd200O54901 278 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Cbfa2t3O54972 620 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 P01882 290 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Rnf144bQ8BKD6 301 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 1810024B03RikQ8BWE1 200 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Slc35e1Q8CD26 409 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Olfr133Q8VG94 312 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Memo1Q91VH6 297 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Pcdhga3Q91XY5 928 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Mrgpra6Q91ZC6 301 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Alkbh4Q9D8F1 300 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 St6galnac5Q9QYJ1 336 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Col12a1Q60847 3120 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Ighv1-78A0A0G2JGN3 117 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Olfr740E9PV79 311 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Lrp3E9Q1T6 790 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Arg2O08691 354 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Prss12O08762 761 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Defb4P82019 63 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Taf9bQ6NZA9 249 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Sema6dQ76KF0 1073 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Gemin8Q8BHE1 238 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Tox4Q8BU11 619 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 SelenofQ9ERR7 162 aa16.38■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Gm45716A0A1B0GRQ0 93 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Tmem200bD3Z0P8 284 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Gm9772F6XPD8 135 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 CtsbP10605 339 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Htr2aP35363 471 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 TaglnP37804 201 aaKnown RBP16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 SordQ64442 357 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Ino80cQ8BHA0 191 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Olfr361Q8VF16 322 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Znf281Q99LI5 893 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Mrpl13Q9D1P0 178 aaKnown RBP16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Aig1Q9D8B1 262 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 RbmxQ9WV02 391 aaKnown RBP16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Olfr747E9PXH6 313 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Olfr749E9Q438 313 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Gm2663F6R7E8 247 aaKnown RBP16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 PtgfrP43117 366 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Vmn1r236Q05A06 334 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Tmprss12Q3V0Q7 336 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 A3galt2Q3V1N9 370 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Tbl1xr1Q8BHJ5 514 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Commd5Q8R395 224 aa16.37■□□□□ 0.21
Shkbp1-201ENSMUST00000003857 Olfr1450Q8VF19 325 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms