Protein–RNA interactions for Protein: Q8R270

Vmn1r217, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r217Q8R270 Gm25239-201ENSMUST00000174915 86 ntBASIC35.59■■■■□ 3.29
Vmn1r217Q8R270 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Vmn1r217Q8R270 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Vmn1r217Q8R270 Gm15042-201ENSMUST00000120212 883 ntBASIC31.21■■■□□ 2.59
Vmn1r217Q8R270 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Vmn1r217Q8R270 Gm24109-201ENSMUST00000175489 103 ntBASIC30.76■■■□□ 2.51
Vmn1r217Q8R270 Gm15045-201ENSMUST00000117359 883 ntBASIC30.47■■■□□ 2.47
Vmn1r217Q8R270 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Vmn1r217Q8R270 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Vmn1r217Q8R270 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Vmn1r217Q8R270 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Vmn1r217Q8R270 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
Vmn1r217Q8R270 Gm23366-201ENSMUST00000175022 89 ntBASIC29.78■■■□□ 2.36
Vmn1r217Q8R270 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Vmn1r217Q8R270 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Vmn1r217Q8R270 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Vmn1r217Q8R270 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.99■■■□□ 2.23
Vmn1r217Q8R270 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Vmn1r217Q8R270 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
Vmn1r217Q8R270 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Vmn1r217Q8R270 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.68■■■□□ 2.18
Vmn1r217Q8R270 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Vmn1r217Q8R270 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
Vmn1r217Q8R270 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Vmn1r217Q8R270 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Vmn1r217Q8R270 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.5■■■□□ 2.15
Vmn1r217Q8R270 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Vmn1r217Q8R270 Psd-208ENSMUST00000224556 2034 ntBASIC28.41■■■□□ 2.14
Vmn1r217Q8R270 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.4■■■□□ 2.14
Vmn1r217Q8R270 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.33■■■□□ 2.13
Vmn1r217Q8R270 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Vmn1r217Q8R270 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Vmn1r217Q8R270 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Vmn1r217Q8R270 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Vmn1r217Q8R270 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.09■■■□□ 2.09
Vmn1r217Q8R270 Gm25238-201ENSMUST00000174914 89 ntBASIC28.04■■■□□ 2.08
Vmn1r217Q8R270 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Vmn1r217Q8R270 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.89■■■□□ 2.06
Vmn1r217Q8R270 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Vmn1r217Q8R270 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Vmn1r217Q8R270 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Vmn1r217Q8R270 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Vmn1r217Q8R270 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
Vmn1r217Q8R270 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.46■■□□□ 1.99
Vmn1r217Q8R270 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.4■■□□□ 1.98
Vmn1r217Q8R270 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Vmn1r217Q8R270 Gm27325-201ENSMUST00000175467 74 ntBASIC27.34■■□□□ 1.97
Vmn1r217Q8R270 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Vmn1r217Q8R270 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Vmn1r217Q8R270 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.22■■□□□ 1.95
Vmn1r217Q8R270 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Vmn1r217Q8R270 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Vmn1r217Q8R270 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.15■■□□□ 1.94
Vmn1r217Q8R270 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.12■■□□□ 1.93
Vmn1r217Q8R270 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
Vmn1r217Q8R270 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.04■■□□□ 1.92
Vmn1r217Q8R270 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Vmn1r217Q8R270 Gm25262-201ENSMUST00000174934 133 ntBASIC26.89■■□□□ 1.9
Vmn1r217Q8R270 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Vmn1r217Q8R270 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Vmn1r217Q8R270 Rab21-202ENSMUST00000218831 843 ntBASIC26.82■■□□□ 1.88
Vmn1r217Q8R270 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Vmn1r217Q8R270 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Vmn1r217Q8R270 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.8■■□□□ 1.88
Vmn1r217Q8R270 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Vmn1r217Q8R270 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.73■■□□□ 1.87
Vmn1r217Q8R270 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Vmn1r217Q8R270 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Vmn1r217Q8R270 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.69■■□□□ 1.86
Vmn1r217Q8R270 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Vmn1r217Q8R270 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Vmn1r217Q8R270 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Vmn1r217Q8R270 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.57■■□□□ 1.84
Vmn1r217Q8R270 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Vmn1r217Q8R270 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Vmn1r217Q8R270 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Vmn1r217Q8R270 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Vmn1r217Q8R270 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Vmn1r217Q8R270 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Vmn1r217Q8R270 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Vmn1r217Q8R270 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.4■■□□□ 1.82
Vmn1r217Q8R270 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.4■■□□□ 1.82
Vmn1r217Q8R270 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Vmn1r217Q8R270 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.36■■□□□ 1.81
Vmn1r217Q8R270 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.35■■□□□ 1.81
Vmn1r217Q8R270 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Vmn1r217Q8R270 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.29■■□□□ 1.8
Vmn1r217Q8R270 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Vmn1r217Q8R270 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Vmn1r217Q8R270 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.24■■□□□ 1.79
Vmn1r217Q8R270 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Vmn1r217Q8R270 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Vmn1r217Q8R270 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Vmn1r217Q8R270 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Vmn1r217Q8R270 Gm26115-201ENSMUST00000175605 87 ntBASIC26.18■■□□□ 1.78
Vmn1r217Q8R270 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Vmn1r217Q8R270 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Vmn1r217Q8R270 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.14■■□□□ 1.78
Vmn1r217Q8R270 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Vmn1r217Q8R270 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.08■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 171.6 ms