Protein–RNA interactions for Protein: Q8R272

Vmn1r220, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r220Q8R272 Gm25239-201ENSMUST00000174915 86 ntBASIC33.81■■■■□ 3
Vmn1r220Q8R272 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Vmn1r220Q8R272 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Vmn1r220Q8R272 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Vmn1r220Q8R272 Gm15042-201ENSMUST00000120212 883 ntBASIC29.76■■■□□ 2.35
Vmn1r220Q8R272 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Vmn1r220Q8R272 Gm24109-201ENSMUST00000175489 103 ntBASIC29.16■■■□□ 2.26
Vmn1r220Q8R272 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
Vmn1r220Q8R272 Gm15045-201ENSMUST00000117359 883 ntBASIC29.07■■■□□ 2.24
Vmn1r220Q8R272 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Vmn1r220Q8R272 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Vmn1r220Q8R272 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Vmn1r220Q8R272 Gm23366-201ENSMUST00000175022 89 ntBASIC28.31■■■□□ 2.12
Vmn1r220Q8R272 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Vmn1r220Q8R272 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Vmn1r220Q8R272 Psd-208ENSMUST00000224556 2034 ntBASIC27.91■■■□□ 2.06
Vmn1r220Q8R272 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.9■■■□□ 2.06
Vmn1r220Q8R272 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Vmn1r220Q8R272 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Vmn1r220Q8R272 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Vmn1r220Q8R272 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Vmn1r220Q8R272 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Vmn1r220Q8R272 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Vmn1r220Q8R272 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Vmn1r220Q8R272 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Vmn1r220Q8R272 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Vmn1r220Q8R272 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.33■■□□□ 1.97
Vmn1r220Q8R272 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.24■■□□□ 1.95
Vmn1r220Q8R272 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Vmn1r220Q8R272 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.01■■□□□ 1.91
Vmn1r220Q8R272 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Vmn1r220Q8R272 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Vmn1r220Q8R272 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.87■■□□□ 1.89
Vmn1r220Q8R272 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.86■■□□□ 1.89
Vmn1r220Q8R272 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Vmn1r220Q8R272 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Vmn1r220Q8R272 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Vmn1r220Q8R272 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Vmn1r220Q8R272 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Vmn1r220Q8R272 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.65■■□□□ 1.86
Vmn1r220Q8R272 Gm25238-201ENSMUST00000174914 89 ntBASIC26.59■■□□□ 1.85
Vmn1r220Q8R272 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Vmn1r220Q8R272 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.39■■□□□ 1.82
Vmn1r220Q8R272 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Vmn1r220Q8R272 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Vmn1r220Q8R272 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Vmn1r220Q8R272 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Vmn1r220Q8R272 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Vmn1r220Q8R272 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Vmn1r220Q8R272 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Vmn1r220Q8R272 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
Vmn1r220Q8R272 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.13■■□□□ 1.77
Vmn1r220Q8R272 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.1■■□□□ 1.77
Vmn1r220Q8R272 Gm27325-201ENSMUST00000175467 74 ntBASIC26.09■■□□□ 1.77
Vmn1r220Q8R272 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Vmn1r220Q8R272 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Vmn1r220Q8R272 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Vmn1r220Q8R272 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.88■■□□□ 1.73
Vmn1r220Q8R272 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Vmn1r220Q8R272 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.86■■□□□ 1.73
Vmn1r220Q8R272 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.82■■□□□ 1.72
Vmn1r220Q8R272 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.82■■□□□ 1.72
Vmn1r220Q8R272 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Vmn1r220Q8R272 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Vmn1r220Q8R272 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.72■■□□□ 1.71
Vmn1r220Q8R272 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
Vmn1r220Q8R272 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Vmn1r220Q8R272 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Vmn1r220Q8R272 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Vmn1r220Q8R272 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Vmn1r220Q8R272 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Vmn1r220Q8R272 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Vmn1r220Q8R272 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Vmn1r220Q8R272 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Vmn1r220Q8R272 Rab21-202ENSMUST00000218831 843 ntBASIC25.52■■□□□ 1.68
Vmn1r220Q8R272 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Vmn1r220Q8R272 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.48■■□□□ 1.67
Vmn1r220Q8R272 Gm25262-201ENSMUST00000174934 133 ntBASIC25.45■■□□□ 1.66
Vmn1r220Q8R272 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.43■■□□□ 1.66
Vmn1r220Q8R272 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.41■■□□□ 1.66
Vmn1r220Q8R272 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Vmn1r220Q8R272 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Vmn1r220Q8R272 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Vmn1r220Q8R272 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.35■■□□□ 1.65
Vmn1r220Q8R272 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Vmn1r220Q8R272 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Vmn1r220Q8R272 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Vmn1r220Q8R272 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Vmn1r220Q8R272 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Vmn1r220Q8R272 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vmn1r220Q8R272 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.09■■□□□ 1.61
Vmn1r220Q8R272 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.08■■□□□ 1.61
Vmn1r220Q8R272 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Vmn1r220Q8R272 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.99■■□□□ 1.59
Vmn1r220Q8R272 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Vmn1r220Q8R272 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Vmn1r220Q8R272 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Vmn1r220Q8R272 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Vmn1r220Q8R272 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.96■■□□□ 1.59
Vmn1r220Q8R272 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 211.7 ms