RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 USP42Q9H9J4 1324 aaKnown RBP1.8□□□□□ -2.12
CDKL5-207ENST00000624700 ITGB4P16144 1822 aa1.8□□□□□ -2.12
CDKL5-207ENST00000624700 ATAD5Q96QE3 1844 aa1.8□□□□□ -2.12
CDKL5-207ENST00000624700 ZNF638Q14966 1978 aaKnown RBP1.79□□□□□ -2.12
CDKL5-207ENST00000624700 IGKV1D-37A0A075B6S9 117 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 A6NED7 52 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 FABP7O15540 132 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 SH2D1AO60880 128 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 CST4P01036 141 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 CBR1P16152 277 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 AKR1C4P17516 323 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 KCNJ3P48549 501 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 INPP1P49441 399 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 PLTPP55058 493 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 C1QTNF8P60827 252 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 XIAPP98170 497 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 ZNF322Q6U7Q0 402 aaPredicted RBP1.79□□□□□ -2.12
CDKL5-207ENST00000624700 Q6ZT83 130 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 LRRC6Q86X45 466 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 LYPD6Q86Y78 171 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 ZIC4Q8N9L1 334 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 MAL2Q969L2 176 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 HIST1H2BAQ96A08 127 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 C20orf166-AS1Q96NR2 134 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 OR8B2Q96RD0 313 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 SIKE1Q9BRV8 207 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 RBMX2Q9Y388 322 aaKnown RBP1.79□□□□□ -2.12
CDKL5-207ENST00000624700 U3KQK5 164 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 MYO16Q9Y6X6 1858 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 LCTP09848 1927 aa1.79□□□□□ -2.12
CDKL5-207ENST00000624700 IGHV3OR15-7A0A075B7D8 119 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 A0A1B0GW15 77 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 ARGFXA6NJG6 315 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 F8VP50 259 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 TP53I11O14683 189 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 EEF1E1O43324 174 aaKnown RBP1.78□□□□□ -2.12
CDKL5-207ENST00000624700 DENRO43583 198 aaKnown RBP1.78□□□□□ -2.12
CDKL5-207ENST00000624700 TPM1P09493 284 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 CCL2P13500 99 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 TSPOP30536 169 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 PRDX1Q06830 199 aaKnown RBP1.78□□□□□ -2.12
CDKL5-207ENST00000624700 PAFAH1B3Q15102 231 aaKnown RBP1.78□□□□□ -2.12
CDKL5-207ENST00000624700 DGAT2L6Q6ZPD8 337 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 CLEC20AQ6ZU45 233 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 OR4K13Q8NH42 304 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 FAM45AQ8TCE6 357 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 SPPL2BQ8TCT7 592 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 ZNF75CPQ92670 426 aaPredicted RBP1.78□□□□□ -2.12
CDKL5-207ENST00000624700 PPWD1Q96BP3 646 aaKnown RBP1.78□□□□□ -2.12
CDKL5-207ENST00000624700 C19orf60Q96EN9 201 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 REEP6Q96HR9 211 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 B9D2Q9BPU9 175 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 EBPLQ9BY08 206 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 ARL6Q9H0F7 186 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 HAUS4Q9H6D7 363 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 TUBA4BQ9H853 241 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 OR5V1Q9UGF6 321 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 RPUSD1Q9UJJ7 312 aaKnown RBP1.78□□□□□ -2.12
CDKL5-207ENST00000624700 NXT1Q9UKK6 140 aaKnown RBP1.78□□□□□ -2.12
CDKL5-207ENST00000624700 CEP350Q5VT06 3117 aa1.78□□□□□ -2.12
CDKL5-207ENST00000624700 PLXNA3P51805 1871 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 LOC100506127A0A0U1RQW1 187 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 SDHAF1A6NFY7 115 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 C3orf84H3BNL1 204 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 CDIPTO14735 213 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 LDOC1O95751 146 aaPredicted RBP1.77□□□□□ -2.13
CDKL5-207ENST00000624700 IGKV5-2P06315 115 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 SPNP16150 400 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 ZNF3P17036 446 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 ATF1P18846 271 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 MAGEA3P43357 314 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 Q3ZCU0 254 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 C10orf91Q5T1B1 145 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 MARCH3Q86UD3 253 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 KRTCAP2Q8N6L1 136 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 CDRT4Q8N9R6 151 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 GPR119Q8TDV5 335 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 KCTD4Q8WVF5 259 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 CATSPER2Q96P56 530 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 LRRC19Q9H756 370 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 MAT2BQ9NZL9 334 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 VPREB3Q9UKI3 123 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 SAMHD1Q9Y3Z3 626 aaKnown RBP1.77□□□□□ -2.13
CDKL5-207ENST00000624700 CACNA1SQ13698 1873 aa1.77□□□□□ -2.13
CDKL5-207ENST00000624700 NUP153P49790 1475 aaKnown RBP1.76□□□□□ -2.13
CDKL5-207ENST00000624700 KIAA0232Q92628 1395 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 FBN1P35555 2871 aaKnown RBP1.76□□□□□ -2.13
CDKL5-207ENST00000624700 ZNF879B4DU55 563 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 KLRC4-KLRK1H3BQV0 150 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 BOLA2-SMG1P6H3BVE0 249 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 FADS2O95864 444 aaKnown RBP1.76□□□□□ -2.13
CDKL5-207ENST00000624700 GZMHP20718 246 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 S100A2P29034 98 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 CRABP1P29762 137 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 FLOT2Q14254 428 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 AADACL4Q5VUY2 407 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 ELP2Q6IA86 826 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 LAIR2Q6ISS4 152 aa1.76□□□□□ -2.13
CDKL5-207ENST00000624700 OR2AE1Q8NHA4 323 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms