RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 ETV1P50549 477 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 RAB13P51153 203 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 DYNLT3P51808 116 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 TAS2R43P59537 309 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 ST3GAL4Q11206 333 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 GPR176Q14439 515 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 CDK5R1Q15078 307 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 RCN1Q15293 331 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 PAN3Q58A45 887 aaKnown RBP5.92□□□□□ -1.46
SCFD1-222ENST00000556768 YIF1BQ5BJH7 314 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 ELP2Q6IA86 826 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 CCDC144NLQ6NUI1 221 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 STX19Q8N4C7 294 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 CNIH3Q8TBE1 160 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 APH1BQ8WW43 257 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 CORO2AQ92828 525 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 GHSRQ92847 366 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 SMIM19Q96E16 107 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 METTL9Q9H1A3 318 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-222ENST00000556768 ING4Q9UNL4 249 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 TCF19Q9Y242 345 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 MEIKINA0A087WXM9 373 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF729A6NN14 1252 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-222ENST00000556768 SLC33A1O00400 549 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-222ENST00000556768 HSPB6O14558 160 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 MYL12BO14950 172 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 CLIC3O95833 236 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 CSF1P09603 554 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 VSIG10L2P0DP72 767 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 GZMHP20718 246 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 PAX6P26367 422 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 BDKRB2P30411 391 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 GLIPR1P48060 266 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 BDH1Q02338 343 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 RIPK1Q13546 671 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 RBM39Q14498 530 aaKnown RBP5.92□□□□□ -1.46
SCFD1-222ENST00000556768 IL13RA2Q14627 380 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 ATXN7L3Q14CW9 347 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-222ENST00000556768 HERPUD1Q15011 391 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 DDI2Q5TDH0 399 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 OR2G6Q5TZ20 316 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 OR51T1Q8NGJ9 327 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 OR52N1Q8NH53 320 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 THRSPQ92748 146 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF649Q9BS31 505 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 TAS2R4Q9NYW5 299 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 ST3GAL6Q9Y274 331 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 ERGIC3Q9Y282 383 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 KBTBD11-OT1A0A1B0GTJ5 212 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 OGG1O15527 345 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 OR7C1O76099 320 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-222ENST00000556768 GTF2F2P13984 249 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 MALP21145 153 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 NFYBP25208 207 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 CAPGP40121 348 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 ZP1P60852 638 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 EMX1Q04741 257 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-222ENST00000556768 Q499Y3 187 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 PRAMEF5Q5TYX0 476 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 CFAP161Q6P656 301 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 TEPPQ6URK8 271 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 LINC00596Q86U02 117 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 TMEM219Q86XT9 240 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 OSR2Q8N2R0 312 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 NCOR1P1Q9H4R4 102 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 DCLRE1BQ9H816 532 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 SPACA1Q9HBV2 294 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 RAB9BQ9NP90 201 aa5.91□□□□□ -1.46
SCFD1-222ENST00000556768 CNOT2Q9NZN8 540 aaKnown RBP5.91□□□□□ -1.46
SCFD1-222ENST00000556768 AMMECR1Q9Y4X0 333 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-222ENST00000556768 GABRPO00591 440 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 IGLV1-40P01703 118 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 FAM106CPP0CH98 169 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 MAPK3P27361 379 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-222ENST00000556768 GLP1RP43220 463 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 EFNB2P52799 333 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 DEFA6Q01524 100 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 SLC22A6Q4U2R8 563 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 KHDC1LQ5JSQ8 128 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 MZT2BQ6NZ67 158 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF529Q6P280 563 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 Q6P435 159 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 C16orf82Q7Z2V1 217 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 JAGN1Q8N5M9 183 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 KLHDC1Q8N7A1 406 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 BPIFB6Q8NFQ5 453 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 OR5AN1Q8NGI8 311 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 OR51A2Q8NGJ7 313 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 OR9G1Q8NH87 305 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 FAM110DQ8TAY7 271 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-222ENST00000556768 PIFOQ8TCI5 191 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 NEK7Q8TDX7 302 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 GGHQ92820 318 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 RPEQ96AT9 228 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 MRPS24Q96EL2 167 aaKnown RBP5.9□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF184Q99676 751 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-222ENST00000556768 SCN3BQ9NY72 215 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 CLEC2DQ9UHP7 191 aa5.9□□□□□ -1.46
SCFD1-222ENST00000556768 NOTCH1P46531 2555 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms