RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 PRAMEF5Q5TYX0 476 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 RSBN1Q5VWQ0 802 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-205ENST00000556310 DHRS7BQ6IAN0 325 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-205ENST00000556310 OR52W1Q6IF63 320 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 GLIPR1L1Q6UWM5 242 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 LHFPL4Q7Z7J7 247 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 OR4D6Q8NGJ1 314 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 TAF15Q92804 592 aaKnown RBP eCLIP9.35□□□□□ -0.91
SLIRP-205ENST00000556310 MRPS24Q96EL2 167 aaKnown RBP9.35□□□□□ -0.91
SLIRP-205ENST00000556310 SSX3Q99909 188 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 ZNF747Q9BV97 191 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 DPCDQ9BVM2 203 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-205ENST00000556310 BARHL1Q9BZE3 327 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 Q9H521 79 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 TCF7L1Q9HCS4 588 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 ING3Q9NXR8 418 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 ZNF581Q9P0T4 197 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 KIF25Q9UIL4 384 aa9.35□□□□□ -0.91
SLIRP-205ENST00000556310 NBEAL1Q6ZS30 2694 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 MEIKINA0A087WXM9 373 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 MMP23AO75900 390 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 UCHL1P09936 223 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 PSMA1P25786 263 aaKnown RBP9.34□□□□□ -0.91
SLIRP-205ENST00000556310 CD34P28906 385 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 GP2P55259 537 aaKnown RBP9.34□□□□□ -0.91
SLIRP-205ENST00000556310 GABARAPL2P60520 117 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 DYNC1I2Q13409 638 aaKnown RBP9.34□□□□□ -0.91
SLIRP-205ENST00000556310 HSD17B12Q53GQ0 312 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 LDLRAD2Q5SZI1 272 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 MINOS1Q5TGZ0 78 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 ZNF367Q7RTV3 350 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 CEACAM19Q7Z692 300 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 LRRTM1Q86UE6 522 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 RTN4RL2Q86UN3 420 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 SUMF2Q8NBJ7 301 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 PLPPR1Q8TBJ4 325 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 MALSU1Q96EH3 234 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 BEX1Q9HBH7 125 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 SPACA1Q9HBV2 294 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 GHRLQ9UBU3 117 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 MINOS1-NBL1R4GNA1 71 aa9.34□□□□□ -0.91
SLIRP-205ENST00000556310 A0A087X0M5 115 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 KBTBD11-OT1A0A1B0GTJ5 212 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 A0A1B0GX30 115 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A10PA6NDY2 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A18PA6NE21 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A16PA6NEW6 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A20PA6NIJ5 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A7PA6NKC0 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A22PA8MWA6 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A12PA8MX19 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A5PA8MXJ8 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A23PA8MXZ1 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 IL1AP01583 271 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A15PP0C7V4 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A13PP0C7W8 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A14PP0C7W9 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 FAM90A24PP0C7X0 464 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 CGB3P0DN86 165 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 CGB7P0DN87 165 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 MGMTP16455 207 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 CPEP16870 476 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 PAX6P26367 422 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 GDNFP39905 211 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 MAP2K4P45985 399 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 RPS25P62851 125 aaKnown RBP9.33□□□□□ -0.92
SLIRP-205ENST00000556310 C17orf58Q2M2W7 97 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 GLT8D1Q68CQ7 371 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 SLC35E4Q6ICL7 350 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 SHISA2Q6UWI4 295 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 DYNAPQ8N1N2 210 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 ZNF565Q8N9K5 539 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 OR4P4Q8NGL7 312 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 OR13A1Q8NGR1 328 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 ZNF596Q8TC21 504 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 WFDC12Q8WWY7 111 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 MGLLQ99685 303 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 SLITRK2Q9H156 845 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 LINC00574Q9H8X3 128 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 RAB18Q9NP72 206 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 CALYQ9NYX4 217 aa9.33□□□□□ -0.92
SLIRP-205ENST00000556310 RCC2Q9P258 522 aaKnown RBP9.33□□□□□ -0.92
SLIRP-205ENST00000556310 RRP15Q9Y3B9 282 aaKnown RBP9.33□□□□□ -0.92
SLIRP-205ENST00000556310 TMEM30CPA0ZSE6 113 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 CLPSL1A2RUU4 121 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 DENRO43583 198 aaKnown RBP9.32□□□□□ -0.92
SLIRP-205ENST00000556310 MRPS14O60783 128 aaKnown RBP9.32□□□□□ -0.92
SLIRP-205ENST00000556310 CRTAPO75718 401 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-205ENST00000556310 IGLV1-47P01700 117 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 UBBP0CG47 229 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 SRMP19623 302 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 HTR1DP28221 377 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 GABRA5P31644 462 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 DYNLT3P51808 116 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 FAM189A2Q15884 450 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 SSX2Q16385 188 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 LY6EQ16553 131 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 C1orf100Q5SVJ3 147 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 ATAD3CQ5T2N8 411 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms