RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 BCL7BQ9BQE9 202 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 UQCC2Q9BRT2 126 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 DPCDQ9BVM2 203 aaPredicted RBP12.45□□□□□ -0.42
CPSF1-210ENST00000532935 NCOR1P1Q9H4R4 102 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 ISYNA1Q9NPH2 558 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 KIF25Q9UIL4 384 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 NBEAL1Q6ZS30 2694 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 MEIKINA0A087WXM9 373 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 MEGF11A6BM72 1044 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 ZNF729A6NN14 1252 aaPredicted RBP12.44□□□□□ -0.42
CPSF1-210ENST00000532935 SC5DO75845 299 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 HSMCR30P0CW71 290 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 GDNFP39905 211 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 GLP1RP43220 463 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 MAP2K4P45985 399 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 PAX5Q02548 391 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 TPBGQ13641 420 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 LY6EQ16553 131 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 C17orf58Q2M2W7 97 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 MINOS1Q5TGZ0 78 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 SHISA2Q6UWI4 295 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 CEACAM19Q7Z692 300 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 PLPPR1Q8TBJ4 325 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 MRPS24Q96EL2 167 aaKnown RBP12.44□□□□□ -0.42
CPSF1-210ENST00000532935 TCF7L1Q9HCS4 588 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 ACOT13Q9NPJ3 140 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 CEPT1Q9Y6K0 416 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 MINOS1-NBL1R4GNA1 71 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 PKD1L1Q8TDX9 2849 aa12.44□□□□□ -0.42
CPSF1-210ENST00000532935 KBTBD11-OT1A0A1B0GTJ5 212 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 CLPSL1A2RUU4 121 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 VGLL3A8MV65 326 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 CGB3P0DN86 165 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 CGB7P0DN87 165 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 MLLT11Q13015 90 aaPredicted RBP12.43□□□□□ -0.42
CPSF1-210ENST00000532935 NEDD8Q15843 81 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 FAM189A2Q15884 450 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 SSX2Q16385 188 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 PLA1AQ53H76 456 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 ATAD3CQ5T2N8 411 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 FOXB2Q5VYV0 432 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 OLFML2AQ68BL7 652 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 LRRTM1Q86UE6 522 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 RTN4RL2Q86UN3 420 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 ABHD12Q8N2K0 398 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 ZNF565Q8N9K5 539 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 OR13A1Q8NGR1 328 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 NDNFQ8TB73 568 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 PIFOQ8TCI5 191 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 PHYHIPQ92561 330 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 TMEM203Q969S6 136 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 SLITRK2Q9H156 845 aa12.43□□□□□ -0.42
CPSF1-210ENST00000532935 RSL24D1Q9UHA3 163 aaKnown RBP12.43□□□□□ -0.42
CPSF1-210ENST00000532935 FAM172BPA6NC97 362 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 UCHL1P09936 223 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 CPEP16870 476 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 CD34P28906 385 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 TMBIM6P55061 237 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 RPS25P62851 125 aaKnown RBP12.42□□□□□ -0.42
CPSF1-210ENST00000532935 HSD17B12Q53GQ0 312 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 SLC35E4Q6ICL7 350 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 BRICD5Q6PL45 260 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 Q6ZSV7 163 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 OR4P4Q8NGL7 312 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 LINC01006Q8NI28 216 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 MGLLQ99685 303 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 BANF2Q9H503 90 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 ZNF286AQ9HBT8 521 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 CALYQ9NYX4 217 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 HILPDAQ9Y5L2 63 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 CMYA5Q8N3K9 4069 aa12.42□□□□□ -0.42
CPSF1-210ENST00000532935 TMEM30CPA0ZSE6 113 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 CRTAPO75718 401 aaPredicted RBP12.41□□□□□ -0.42
CPSF1-210ENST00000532935 TSPAN9O75954 239 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 MGMTP16455 207 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 SRMP19623 302 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 NFYBP25208 207 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 HTR1DP28221 377 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 RAB13P51153 203 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 TRAM1Q15629 374 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 GLT8D1Q68CQ7 371 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 TMEM91Q6ZNR0 172 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 ZNF367Q7RTV3 350 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 TMEM104Q8NE00 496 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 ZNF596Q8TC21 504 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 MRGPRDQ8TDS7 321 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 NEK7Q8TDX7 302 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 WFDC12Q8WWY7 111 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 KIRREL1Q96J84 757 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 SELENOIQ9C0D9 397 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 C16orf95Q9H693 158 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 LINC00574Q9H8X3 128 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 SPACA1Q9HBV2 294 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 RAB18Q9NP72 206 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 ABCB10Q9NRK6 738 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 RCC2Q9P258 522 aaKnown RBP12.41□□□□□ -0.42
CPSF1-210ENST00000532935 GHRLQ9UBU3 117 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 RNF114Q9Y508 228 aa12.41□□□□□ -0.42
CPSF1-210ENST00000532935 A0A087X0M5 115 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 TRAV39A0A0B4J263 110 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms