RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 LCTP09848 1927 aa2.09□□□□□ -2.08
HERC4-215ENST00000515753 MCM3APO60318 1980 aa2.09□□□□□ -2.08
HERC4-215ENST00000515753 NACAE9PAV3 2078 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 KMT2EQ8IZD2 1858 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 EYSQ5T1H1 3165 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 C9J4A7 227 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 GOLGA8KD6RF30 607 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 INS-IGF2F8WCM5 200 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 GOLGA8MH3BSY2 632 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 SYNGR1O43759 233 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 SLC22A5O76082 557 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 TRBV12-3P01733 135 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 HLA-AP01891 365 aaKnown RBP2.08□□□□□ -2.08
HERC4-215ENST00000515753 CISD3P0C7P0 127 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 OCM2P0CE71 109 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 NEFHP12036 1026 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 HIST1H1CP16403 213 aaKnown RBP2.08□□□□□ -2.08
HERC4-215ENST00000515753 TCN2P20062 427 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 PAX6P26367 422 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 PSMB9P28065 219 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 PSMB5P28074 263 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 SSTR5P35346 364 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 APLNRP35414 380 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 CXCL5P42830 114 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 UBE2AP49459 152 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 PSMB2P49721 201 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 AQP5P55064 265 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 CDKN2DP55273 166 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 OR10A3P58181 314 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 PPIDQ08752 370 aaKnown RBP2.08□□□□□ -2.08
HERC4-215ENST00000515753 PSG7Q13046 419 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 DAZ2Q13117 558 aaKnown RBP2.08□□□□□ -2.08
HERC4-215ENST00000515753 ERCC8Q13216 396 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 NAB1Q13506 487 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 HERPUD1Q15011 391 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 IL17AQ16552 155 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 CEACAM16Q2WEN9 425 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 TMEM236Q5W0B7 351 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 C8orf74Q6P047 294 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 IGFL2Q6UWQ7 119 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 DCXRQ7Z4W1 244 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 TGIF2LYQ8IUE0 185 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 RNF175Q8N4F7 328 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 OR8J2Q8NGG1 315 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 OR6N1Q8NGY5 312 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 RXFP4Q8TDU9 374 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 NELFBQ8WX92 580 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 HGDQ93099 445 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 TMEM159Q96B96 161 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 S100PBPQ96BU1 408 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 CMTM5Q96DZ9 223 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 OR10C1Q96KK4 312 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 FAM210AQ96ND0 272 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 CAMK2N2Q96S95 79 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 TIMM17AQ99595 171 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 SDHCQ99643 169 aaPredicted RBP2.08□□□□□ -2.08
HERC4-215ENST00000515753 NRTNQ99748 197 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 TMED9Q9BVK6 235 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 SAMD10Q9BYL1 202 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 DAZ3Q9NR90 486 aaKnown RBP2.08□□□□□ -2.08
HERC4-215ENST00000515753 PLEKHJ1Q9NW61 149 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 RBM22Q9NW64 420 aaKnown RBP eCLIP2.08□□□□□ -2.08
HERC4-215ENST00000515753 STOML2Q9UJZ1 356 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 ORC6Q9Y5N6 252 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 PTPRJQ12913 1337 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 SCN2AQ99250 2005 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 PRUNE2Q8WUY3 3088 aa2.08□□□□□ -2.08
HERC4-215ENST00000515753 PLXNA3P51805 1871 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 GBF1Q92538 1859 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 PTPRSQ13332 1948 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 C2orf16Q68DN1 1984 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 NCOR1O75376 2440 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 TET2Q6N021 2002 aaPredicted RBP2.07□□□□□ -2.08
HERC4-215ENST00000515753 CHD9Q3L8U1 2897 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 IGLV11-55A0A075B6I3 123 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 IGLV1-50A0A075B6I6 118 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 SMIM26A0A096LP01 95 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 TRAV8-6A0A0B4J262 113 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 IGKV1-8A0A0C4DH67 115 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 CXorf51AA0A1B0GTR3 108 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 NKX2-6A6NCS4 301 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 SMIM23A6NLE4 172 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 FTCDNL1E5RQL4 147 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 FGF16O43320 207 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 MPZL2O60487 215 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 SS18L1O75177 396 aaPredicted RBP2.07□□□□□ -2.08
HERC4-215ENST00000515753 ADAP1O75689 374 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 RP2O75695 350 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 SLC25A14O95258 325 aaPredicted RBP2.07□□□□□ -2.08
HERC4-215ENST00000515753 ASS1P00966 412 aaKnown RBP2.07□□□□□ -2.08
HERC4-215ENST00000515753 MRPL3P09001 348 aaKnown RBP2.07□□□□□ -2.08
HERC4-215ENST00000515753 PVALBP20472 110 aaPredicted RBP2.07□□□□□ -2.08
HERC4-215ENST00000515753 DTYMKP23919 212 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 RBMXP38159 391 aaKnown RBP2.07□□□□□ -2.08
HERC4-215ENST00000515753 PPP1R2P41236 205 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 GCLMP48507 274 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 TGM4P49221 684 aa2.07□□□□□ -2.08
HERC4-215ENST00000515753 ZNF133P52736 654 aaPredicted RBP2.07□□□□□ -2.08
HERC4-215ENST00000515753 RPL23P62829 140 aaKnown RBP2.07□□□□□ -2.08
HERC4-215ENST00000515753 CRADDP78560 199 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms