RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 TSSK6Q9BXA6 273 aa4.11□□□□□ -1.75
PTCD3-219ENST00000494323 DNTTIP1Q9H147 329 aa4.11□□□□□ -1.75
PTCD3-219ENST00000494323 TLNRD1Q9H1K6 362 aa4.11□□□□□ -1.75
PTCD3-219ENST00000494323 RANBP3Q9H6Z4 567 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-219ENST00000494323 HEXA-AS1Q9H8Q6 139 aa4.11□□□□□ -1.75
PTCD3-219ENST00000494323 MED20Q9H944 212 aa4.11□□□□□ -1.75
PTCD3-219ENST00000494323 DNAJC4Q9NNZ3 241 aa4.11□□□□□ -1.75
PTCD3-219ENST00000494323 RAB18Q9NP72 206 aa4.11□□□□□ -1.75
PTCD3-219ENST00000494323 SAMD4AQ9UPU9 718 aaKnown RBP4.11□□□□□ -1.75
PTCD3-219ENST00000494323 FAM183AA6NL82 134 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 C15orf62A8K5M9 175 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 ATP8B1O43520 1251 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 CST4P01036 141 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 SEMG1P04279 462 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 ARG1P05089 322 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 FABP3P05413 133 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 H2BFMP0C1H6 154 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 PIPP12273 146 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-219ENST00000494323 PRDX2P32119 198 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 CEBPDP49716 269 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-219ENST00000494323 HCCSP53701 268 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 AANATQ16613 207 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 ZNF585BQ52M93 769 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 TEX30Q5JUR7 227 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 LDLRAD2Q5SZI1 272 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 LINC01590Q5TEZ4 76 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 CCDC121Q6ZUS5 278 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 Q8N2B8 174 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 OR9Q2Q8NGE9 314 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 OR6N2Q8NGY6 317 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 OR4Q3Q8NH05 313 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 ZNF671Q8TAW3 534 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 RNF133Q8WVZ7 376 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 HPSE2Q8WWQ2 592 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 C1QTNF4Q9BXJ3 329 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 NMNAT2Q9BZQ4 307 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 C1orf21Q9H246 121 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 OR51V1Q9H2C8 321 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 OR51I2Q9H344 312 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 GORASP2Q9H8Y8 452 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 ABCB10Q9NRK6 738 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 IL20Q9NYY1 176 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 ZNF222Q9UK12 451 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 HILPDAQ9Y5L2 63 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 MPC1Q9Y5U8 109 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 SNX5Q9Y5X3 404 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 CDH10Q9Y6N8 788 aa4.1□□□□□ -1.75
PTCD3-219ENST00000494323 KMT2CQ8NEZ4 4911 aaKnown RBP4.1□□□□□ -1.75
PTCD3-219ENST00000494323 A0A1W2PRV1 198 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 TCRBV4S1A1TA0A5B7 111 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 A6NDX4 124 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 TMEM210A6NLX4 147 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 VGLL3A8MV65 326 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 PRR32B1ATL7 298 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 TNFRSF11BO00300 401 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 NDUFAB1O14561 156 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 SLC22A2O15244 555 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 ST8SIA3O43173 380 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 SELENOFO60613 162 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 CCDC22O60826 627 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 MTRF1O75570 445 aaKnown RBP4.09□□□□□ -1.75
PTCD3-219ENST00000494323 KRT36O76013 467 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 SOX14O95416 240 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 APOC1P02654 83 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 SNRNP70P08621 437 aaKnown RBP4.09□□□□□ -1.75
PTCD3-219ENST00000494323 CCDC159P0C7I6 412 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 CFL1P23528 166 aaKnown RBP4.09□□□□□ -1.75
PTCD3-219ENST00000494323 CD24P25063 80 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 OPRL1P41146 370 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 SLC25A1P53007 311 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 DLK1P80370 383 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 DYNC1I2Q13409 638 aaKnown RBP4.09□□□□□ -1.75
PTCD3-219ENST00000494323 CEACAM21Q3KPI0 293 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 TCTEX1D4Q5JR98 221 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 ZNF770Q6IQ21 691 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-219ENST00000494323 RPL13AP3Q6NVV1 102 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 HAGHLQ6PII5 290 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-219ENST00000494323 SPSB3Q6PJ21 355 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 C10orf99Q6UWK7 81 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 HACD2Q6Y1H2 254 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 ACP7Q6ZNF0 438 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 RASSF6Q6ZTQ3 369 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 FTMTQ8N4E7 242 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 OR8B12Q8NGG6 310 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 OR5K1Q8NHB7 308 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 RPS4Y2Q8TD47 263 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 AQP3Q92482 292 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 MALSU1Q96EH3 234 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 SDSLQ96GA7 329 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 KRTAP1-5Q9BYS1 174 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 RGCCQ9H4X1 137 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 Q9H8V8 135 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 IL1RAPQ9NPH3 570 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 INPP5EQ9NRR6 644 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 ARMC1Q9NVT9 282 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 ABCD2Q9UBJ2 740 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 CD300AQ9UGN4 299 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 TCF19Q9Y242 345 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 U3KQV3 271 aa4.09□□□□□ -1.75
PTCD3-219ENST00000494323 DSCAML1Q8TD84 2053 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms