RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 FER1L6-AS1Q8NA97 138 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 OR10D4PQ8NGN7 298 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 LRRC20Q8TCA0 184 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 TMEM239Q8WW34 195 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 REEP6Q96HR9 211 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 NAP1L5Q96NT1 182 aaPredicted RBP1.41□□□□□ -2.18
SMC4-223ENST00000493695 KLF6Q99612 283 aaPredicted RBP1.41□□□□□ -2.18
SMC4-223ENST00000493695 EBPLQ9BY08 206 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 NAGKQ9UJ70 344 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 RPUSD1Q9UJJ7 312 aaKnown RBP1.41□□□□□ -2.18
SMC4-223ENST00000493695 TBL2Q9Y4P3 447 aaKnown RBP1.41□□□□□ -2.18
SMC4-223ENST00000493695 VWDEQ8N2E2 1590 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 AK9Q5TCS8 1911 aa1.4□□□□□ -2.18
SMC4-223ENST00000493695 IGHV3OR15-7A0A075B7D8 119 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 A6NED7 52 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 C8orf87E5RJ46 101 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 RNASEK-C17orf49H0YIS7 233 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 BOLA2-SMG1P6H3BVE0 249 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 I3L4J1 428 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 CRXO43186 299 aaPredicted RBP1.4□□□□□ -2.19
SMC4-223ENST00000493695 ENSAO43768 121 aaKnown RBP1.4□□□□□ -2.19
SMC4-223ENST00000493695 SH2D1AO60880 128 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 EPPINO95925 133 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 S100A9P06702 114 aaKnown RBP1.4□□□□□ -2.19
SMC4-223ENST00000493695 ZNF22P17026 224 aaPredicted RBP1.4□□□□□ -2.19
SMC4-223ENST00000493695 EVI2BP34910 448 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 AQP5P55064 265 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 RHOAP61586 193 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 ZBTB6Q15916 424 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 MRPL52Q86TS9 123 aaKnown RBP1.4□□□□□ -2.19
SMC4-223ENST00000493695 NIT1Q86X76 327 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 Q8NDZ9 215 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 FAM45AQ8TCE6 357 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 KCTD4Q8WVF5 259 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 CLDN23Q96B33 292 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 C19orf60Q96EN9 201 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 OR8B2Q96RD0 313 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 ALX4Q9H161 411 aaPredicted RBP1.4□□□□□ -2.19
SMC4-223ENST00000493695 XKR8Q9H6D3 395 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 MRM2Q9UI43 246 aaKnown RBP1.4□□□□□ -2.19
SMC4-223ENST00000493695 POMPQ9Y244 141 aa1.4□□□□□ -2.19
SMC4-223ENST00000493695 YLPM1P49750 1951 aaKnown RBP1.39□□□□□ -2.19
SMC4-223ENST00000493695 RAB3GAP2Q9H2M9 1393 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 A0A1B0GW15 77 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 RAB19A4D1S5 217 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 G3V3Q6 166 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 LTAP01374 205 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 LCN1P31025 176 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 TPBGQ13641 420 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 TRIP13Q15645 432 aaPredicted RBP1.39□□□□□ -2.19
SMC4-223ENST00000493695 BSXQ3C1V8 233 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 AADACL4Q5VUY2 407 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 DGAT2L6Q6ZPD8 337 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 SCXQ7RTU7 201 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 FAM19A3Q7Z5A8 133 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 GATD1Q8NB37 220 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 HBEGFQ99075 208 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 PRSS27Q9BQR3 290 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 SLC23A2Q9UGH3 650 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 POFUT2Q9Y2G5 429 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 SNX24Q9Y343 169 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 ZNF337Q9Y3M9 751 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 PHLDA3Q9Y5J5 127 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 MTCH2Q9Y6C9 303 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 SORL1Q92673 2214 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 COL18A1P39060 1754 aa1.39□□□□□ -2.19
SMC4-223ENST00000493695 COL5A3P25940 1745 aaPredicted RBP1.38□□□□□ -2.19
SMC4-223ENST00000493695 A0A1B0GX12 115 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 INPP1P49441 399 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 OR10A3P58181 314 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 TNNC1P63316 161 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 ZNF181Q2M3W8 571 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 SSX7Q7RTT5 188 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 PDCL2Q8N4E4 241 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 OR8K1Q8NGG5 319 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 OR4A5Q8NH83 315 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 RORBQ92753 470 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 APOL4Q9BPW4 351 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 SIKE1Q9BRV8 207 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 ARL6Q9H0F7 186 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 HAUS4Q9H6D7 363 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 ZNF286AQ9HBT8 521 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 IFT46Q9NQC8 304 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 SYNRGQ9UMZ2 1314 aa1.38□□□□□ -2.19
SMC4-223ENST00000493695 IGKV1-12A0A0C4DH73 117 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 LOC100506127A0A0U1RQW1 187 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 A0A1W2PRG6 482 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 POLR3GO15318 223 aaPredicted RBP1.37□□□□□ -2.19
SMC4-223ENST00000493695 FGF16O43320 207 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 SGCEO43556 437 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 FADS2O95864 444 aaKnown RBP1.37□□□□□ -2.19
SMC4-223ENST00000493695 IGKV1D-12P01611 117 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 APOA1P02647 267 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 GYPCP04921 128 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 ZNF3P17036 446 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 PSMB9P28065 219 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 PYCR1P32322 319 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 UGT2B10P36537 528 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 ETV1P50549 477 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 CST6Q15828 149 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms