RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 OR52N1Q8NH53 320 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 OR2T6Q8NHC8 308 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 RFESDQ8TAC1 157 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 LEAP2Q969E1 77 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 CPNE2Q96FN4 548 aaPredicted RBP8.57□□□□□ -1.04
COL6A3-214ENST00000493608 PGLYRP3Q96LB9 341 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 OR5M11Q96RB7 305 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 ZNF184Q99676 751 aaPredicted RBP8.57□□□□□ -1.04
COL6A3-214ENST00000493608 NPFFR1Q9GZQ6 430 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 METTL9Q9H1A3 318 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 ZNF702PQ9H963 129 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 TMEM138Q9NPI0 162 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 PSORS1C1Q9UIG5 152 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 ST3GAL6Q9Y274 331 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 MINOS1-NBL1R4GNA1 71 aa8.57□□□□□ -1.04
COL6A3-214ENST00000493608 TRBV5-5A0A0J9YX44 114 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 TMEM238LA0A1B0GVL6 79 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 EFCAB10A6NFE3 127 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 ZNF729A6NN14 1252 aaPredicted RBP8.56□□□□□ -1.04
COL6A3-214ENST00000493608 TOR1AO14656 332 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 CSTBP04080 98 aaKnown RBP8.56□□□□□ -1.04
COL6A3-214ENST00000493608 MAS1P04201 325 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 CSN2P05814 226 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 CGB3P0DN86 165 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 CGB7P0DN87 165 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 IGFBP3P17936 291 aaPredicted RBP8.56□□□□□ -1.04
COL6A3-214ENST00000493608 RAB6AP20340 208 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 DEFA6Q01524 100 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 RIPK1Q13546 671 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 IL13RA2Q14627 380 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 Q499Y3 187 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 ASCL4Q6XD76 172 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 Q6ZTK2 550 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 OSR2Q8N2R0 312 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 SUMF2Q8NBJ7 301 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 OR14A2Q96R54 314 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 S100A13Q99584 98 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 CDCA4Q9BXL8 241 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 KRTAP9-9Q9BYP9 154 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 KRTAP9-4Q9BYQ2 154 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 BARHL1Q9BZE3 327 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 OR6C3Q9NZP0 311 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 DPM3Q9P2X0 92 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 PITPNC1Q9UKF7 332 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 HSPE1-MOB4S4R3N1 261 aa8.56□□□□□ -1.04
COL6A3-214ENST00000493608 MEGF8Q7Z7M0 2845 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 KBTBD11-OT1A0A1B0GTJ5 212 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 PTGES3LE9PB15 166 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 BUB1B-PAK6H3BSN5 160 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 GEMIN2O14893 280 aaKnown RBP8.55□□□□□ -1.04
COL6A3-214ENST00000493608 OR7C1O76099 320 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-214ENST00000493608 IGLV1-47P01700 117 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 CELP19835 753 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 DYNLT3P51808 116 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 PRRX1P54821 245 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 BDH1Q02338 343 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 HERPUD1Q15011 391 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 TMEM95Q3KNT9 176 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 SLC22A6Q4U2R8 563 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 YIF1BQ5BJH7 314 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 ATAD3CQ5T2N8 411 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 RSBN1Q5VWQ0 802 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-214ENST00000493608 RTN4RL2Q86UN3 420 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 JAGN1Q8N5M9 183 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 NANOGP1Q8N7R0 232 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 ZNF565Q8N9K5 539 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 Q8NFD4 153 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 UBALD1Q8TB05 177 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 ZNF596Q8TC21 504 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 MRGPRDQ8TDS7 321 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 CCDC107Q8WV48 283 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 SGCDQ92629 289 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 TFAP2CQ92754 450 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 MUL1Q969V5 352 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 DPCDQ9BVM2 203 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-214ENST00000493608 MMP27Q9H306 513 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 RANBP3Q9H6Z4 567 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-214ENST00000493608 DCLRE1BQ9H816 532 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 SERTAD4Q9NUC0 356 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 PLCXD1Q9NUJ7 323 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 CALYQ9NYX4 217 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 IDI2-AS1Q9NZ38 188 aa8.55□□□□□ -1.04
COL6A3-214ENST00000493608 CNOT2Q9NZN8 540 aaKnown RBP8.55□□□□□ -1.04
COL6A3-214ENST00000493608 TRBV5-7A0A0A0MS05 114 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 A0A1W2PPE3 182 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 SH2D7A6NKC9 451 aaPredicted RBP8.54□□□□□ -1.04
COL6A3-214ENST00000493608 FAM90A22PA8MWA6 464 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 LEUTXA8MZ59 168 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 MYL12BO14950 172 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 PIN1P1O15428 100 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 GPX5O75715 221 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 CSF1P09603 554 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 CD28P10747 220 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 VHLP40337 213 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 WNT4P56705 351 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 RBM11P57052 281 aaKnown RBP8.54□□□□□ -1.04
COL6A3-214ENST00000493608 INSL4Q14641 139 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 HLA-DRB5Q30154 266 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 GLIPR1L1Q6UWM5 242 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 C1QL4Q86Z23 238 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms