RNA–Protein interactions for RNA: ENST00000490359.2

LRCH4-208, Transcript of leucine rich repeats and calponin homology domain containing 4, human

TSL 2

Gene LRCH4, Length 540 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH4-208	ENST00000490359	GABRA5	P31644	462 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	GDNF	P39905	211 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	GP2	P55259	537 aa	Known RBP	13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	FAM189A2	Q15884	450 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	C17orf58	Q2M2W7	97 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	LDLRAD2	Q5SZI1	272 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	ATAD3C	Q5T2N8	411 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	LYPD6	Q86Y78	171 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	ABHD12	Q8N2K0	398 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	OR13A1	Q8NGR1	328 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	TMEM203	Q969S6	136 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	UQCC2	Q9BRT2	126 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	NCOR1P1	Q9H4R4	102 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	ISYNA1	Q9NPH2	558 aa		13.57	□□□□□ -0.24
LRCH4-208	ENST00000490359	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	FAM172BP	A6NC97	362 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	PAX5	Q02548	391 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	MLLT11	Q13015	90 aa	Predicted RBP	13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	TPBG	Q13641	420 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	HSD17B12	Q53GQ0	312 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359		Q6ZSV7	163 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	RTN4RL2	Q86UN3	420 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	ZNF565	Q8N9K5	539 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	OR2T6	Q8NHC8	308 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	LINC01006	Q8NI28	216 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	NEK7	Q8TDX7	302 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	PHYHIP	Q92561	330 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	MRPS24	Q96EL2	167 aa	Known RBP	13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	MGLL	Q99685	303 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	CITED1	Q99966	193 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	BANF2	Q9H503	90 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359		Q9H521	79 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	C16orf95	Q9H693	158 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	ABCB10	Q9NRK6	738 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	CALY	Q9NYX4	217 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	HILPDA	Q9Y5L2	63 aa		13.56	□□□□□ -0.24
LRCH4-208	ENST00000490359	TMEM30CP	A0ZSE6	113 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	VGLL3	A8MV65	326 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	CRTAP	O75718	401 aa	Predicted RBP	13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	SC5D	O75845	299 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	UCHL1	P09936	223 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	MGMT	P16455	207 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	CPE	P16870	476 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	NFYB	P25208	207 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	HTR1D	P28221	377 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	CD34	P28906	385 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	RPS25	P62851	125 aa	Known RBP	13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	TBCE	Q15813	527 aa	Predicted RBP	13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	GLT8D1	Q68CQ7	371 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	SLC35E4	Q6ICL7	350 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	LIAT1	Q6ZQX7	453 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	LRRTM1	Q86UE6	522 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	TMEM104	Q8NE00	496 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	OR4P4	Q8NGL7	312 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	ZNF596	Q8TC21	504 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	PIFO	Q8TCI5	191 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	MRGPRD	Q8TDS7	321 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	SELENOI	Q9C0D9	397 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	ZNF286A	Q9HBT8	521 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	SPACA1	Q9HBV2	294 aa		13.55	□□□□□ -0.24
LRCH4-208	ENST00000490359	TRAV39	A0A0B4J263	110 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	TOR1A	O14656	332 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	IL1A	P01583	271 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	CSF1	P09603	554 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	CGB3	P0DN86	165 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	CGB7	P0DN87	165 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	SRM	P19623	302 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	RAB13	P51153	203 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	TRAM1	Q15629	374 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	ZNF367	Q7RTV3	350 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	KIRREL1	Q96J84	757 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	NPFFR1	Q9GZQ6	430 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	IDI2-AS1	Q9NZ38	188 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	DPM3	Q9P2X0	92 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	GHRL	Q9UBU3	117 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	PKD1L1	Q8TDX9	2849 aa		13.54	□□□□□ -0.24
LRCH4-208	ENST00000490359	TSPAN9	O75954	239 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	UBB	P0CG47	229 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	PSMA1	P25786	263 aa	Known RBP	13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	SSTR5	P35346	364 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	PRRX1	P54821	245 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	LTC4S	Q16873	150 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	TMEM91	Q6ZNR0	172 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	RFESD	Q8TAC1	157 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	CAPSL	Q8WWF8	208 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	FAM46B	Q96A09	425 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359		Q96M66	194 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	CST11	Q9H112	138 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	RCC2	Q9P258	522 aa	Known RBP	13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	PITPNC1	Q9UKF7	332 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	TCF19	Q9Y242	345 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359	PEX16	Q9Y5Y5	336 aa		13.53	□□□□□ -0.24
LRCH4-208	ENST00000490359		A0A087X0M5	115 aa		13.52	□□□□□ -0.25
LRCH4-208	ENST00000490359		A0A1B0GX30	115 aa		13.52	□□□□□ -0.25
LRCH4-208	ENST00000490359	FAM90A10P	A6NDY2	464 aa		13.52	□□□□□ -0.25
LRCH4-208	ENST00000490359	FAM90A18P	A6NE21	464 aa		13.52	□□□□□ -0.25
LRCH4-208	ENST00000490359	FAM90A16P	A6NEW6	464 aa		13.52	□□□□□ -0.25
LRCH4-208	ENST00000490359	FAM90A20P	A6NIJ5	464 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms