RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ATP1B3P54709 279 aa9.79□□□□□ -0.84
HPS4-212ENST00000481910 TESK1Q15569 626 aa9.79□□□□□ -0.84
HPS4-212ENST00000481910 PRAMEF6Q5VXH4 476 aa9.79□□□□□ -0.84
HPS4-212ENST00000481910 C17orf107Q6ZR85 190 aa9.79□□□□□ -0.84
HPS4-212ENST00000481910 WDR86Q86TI4 376 aa9.79□□□□□ -0.84
HPS4-212ENST00000481910 OR52N4Q8NGI2 321 aa9.79□□□□□ -0.84
HPS4-212ENST00000481910 MITD1Q8WV92 249 aa9.79□□□□□ -0.84
HPS4-212ENST00000481910 NAGKQ9UJ70 344 aa9.79□□□□□ -0.84
HPS4-212ENST00000481910 ING4Q9UNL4 249 aa9.79□□□□□ -0.84
HPS4-212ENST00000481910 CELSR2Q9HCU4 2923 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 DYSFO75923 2080 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 IGKV1-27A0A075B6S5 117 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 LRP5LA4QPB2 252 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 MEGF11A6BM72 1044 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 CCSO14618 274 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 CDC14BO60729 498 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 LY6HO94772 140 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 GABARAPO95166 117 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 CEBPDP49716 269 aaPredicted RBP9.78□□□□□ -0.84
HPS4-212ENST00000481910 ZNF154Q13106 437 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 KISS1Q15726 138 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 ANGPTL5Q86XS5 388 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 ZNF573Q86YE8 665 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 SCCPDHQ8NBX0 429 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 WFDC12Q8WWY7 111 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 GPER1Q99527 375 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 CLEC5AQ9NY25 188 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 PPP1R3CQ9UQK1 317 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 ARID1AO14497 2285 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 TRAV1-2A0A0B4J238 106 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 A0A1B0GW55 424 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 SHISA3A0PJX4 238 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 K7EP13 123 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 CDIPTO14735 213 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 SIGLEC5O15389 551 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 ALDOBP05062 364 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 ZNF735P0CB33 412 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 DUX4L2P0CJ85 424 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 DUX4L3P0CJ86 424 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 DUX4L4P0CJ87 422 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 DUX4L5P0CJ88 424 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 DUX4L6P0CJ89 424 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 DUX4L7P0CJ90 424 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 ADRA2CP18825 462 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 ZNF93P35789 620 aaPredicted RBP9.78□□□□□ -0.84
HPS4-212ENST00000481910 TGFBR1P36897 503 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 PTGFRP43088 359 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 GATA4P43694 442 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 EFNA4P52798 201 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 MADCAM1Q13477 382 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 HAGHQ16775 308 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 PLAC9Q5JTB6 97 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 HAGHLQ6PII5 290 aaPredicted RBP9.78□□□□□ -0.84
HPS4-212ENST00000481910 RNF144BQ7Z419 303 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 LRRTM1Q86UE6 522 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 MOGAT3Q86VF5 341 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 CALHM1Q8IU99 346 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 JAGN1Q8N5M9 183 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 ZNF383Q8NA42 475 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 CPNE2Q96FN4 548 aaPredicted RBP9.78□□□□□ -0.84
HPS4-212ENST00000481910 FYTTD1Q96QD9 318 aaKnown RBP9.78□□□□□ -0.84
HPS4-212ENST00000481910 OR51I2Q9H344 312 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 FN3KRPQ9HA64 309 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 GCM1Q9NP62 436 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 ZNF701Q9NV72 531 aaPredicted RBP9.78□□□□□ -0.84
HPS4-212ENST00000481910 DUX4Q9UBX2 424 aa9.78□□□□□ -0.84
HPS4-212ENST00000481910 AK6Q9Y3D8 172 aaKnown RBP9.78□□□□□ -0.84
HPS4-212ENST00000481910 BAHCC1Q9P281 2608 aa9.77□□□□□ -0.84
HPS4-212ENST00000481910 ABCA12Q86UK0 2595 aa9.77□□□□□ -0.84
HPS4-212ENST00000481910 IGHV1-69-2A0A0G2JMI3 117 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 PDCD5O14737 125 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 GGCTO75223 188 aaKnown RBP9.77□□□□□ -0.85
HPS4-212ENST00000481910 HIST1H1BP16401 226 aaKnown RBP9.77□□□□□ -0.85
HPS4-212ENST00000481910 ZNF25P17030 456 aaPredicted RBP9.77□□□□□ -0.85
HPS4-212ENST00000481910 PVALBP20472 110 aaPredicted RBP9.77□□□□□ -0.85
HPS4-212ENST00000481910 SDC2P34741 201 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 ATP5J2P56134 94 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 NCS1P62166 190 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 SCGB2A2Q13296 93 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 CTF1Q16619 201 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 GLT8D1Q68CQ7 371 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 BAIAP2L2Q6UXY1 529 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 ZNF826PQ6ZT77 177 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 C11orf53Q8IXP5 236 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 DYNC2LI1Q8TCX1 351 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 CCL17Q92583 94 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 ERGIC1Q969X5 290 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 PERPQ96FX8 193 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 NKX3-1Q99801 234 aaPredicted RBP9.77□□□□□ -0.85
HPS4-212ENST00000481910 NKX6-2Q9C056 277 aaPredicted RBP9.77□□□□□ -0.85
HPS4-212ENST00000481910 CSTL1Q9H114 145 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 ZFP57Q9NU63 452 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 C1orf123Q9NWV4 160 aa9.77□□□□□ -0.85
HPS4-212ENST00000481910 LYNX1G3V0Z9 82 aa9.76□□□□□ -0.85
HPS4-212ENST00000481910 LYNX1P0DP58 116 aa9.76□□□□□ -0.85
HPS4-212ENST00000481910 COL8A2P25067 703 aa9.76□□□□□ -0.85
HPS4-212ENST00000481910 PTH2RP49190 550 aa9.76□□□□□ -0.85
HPS4-212ENST00000481910 MTNR1BP49286 362 aa9.76□□□□□ -0.85
HPS4-212ENST00000481910 MXD1Q05195 221 aa9.76□□□□□ -0.85
HPS4-212ENST00000481910 SNX29P2Q8IUI4 249 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms