RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 ACP6Q9NPH0 428 aa1.73□□□□□ -2.13
COPA-204ENST00000481522 GCNT4Q9P109 453 aa1.73□□□□□ -2.13
COPA-204ENST00000481522 CLN8Q9UBY8 286 aa1.73□□□□□ -2.13
COPA-204ENST00000481522 CD160O95971 181 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 ERCC1P07992 297 aaPredicted RBP1.72□□□□□ -2.13
COPA-204ENST00000481522 CLTAP09496 248 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 PGA4P0DJD7 388 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 PGA3P0DJD8 388 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 GABRR2P28476 465 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 CD70P32970 193 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 PCK1P35558 622 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 POLR2IP36954 125 aaKnown RBP1.72□□□□□ -2.13
COPA-204ENST00000481522 MPV17P39210 176 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 IDH2P48735 452 aaKnown RBP1.72□□□□□ -2.13
COPA-204ENST00000481522 FABP6P51161 128 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 MEF2BQ02080 365 aaPredicted RBP1.72□□□□□ -2.13
COPA-204ENST00000481522 BAMBIQ13145 260 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 ZNHIT3Q15649 155 aaPredicted RBP1.72□□□□□ -2.13
COPA-204ENST00000481522 KLHL12Q53G59 568 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 GCSAMLQ5JQS6 135 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 MED27Q6P2C8 311 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 TMPRSS11AQ6ZMR5 421 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 EIF3MQ7L2H7 374 aaKnown RBP1.72□□□□□ -2.13
COPA-204ENST00000481522 SSX9Q7RTT3 188 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 KRTAP13-1Q8IUC0 172 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 BBS5Q8N3I7 341 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 OR1L1Q8NH94 360 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 RXFP4Q8TDU9 374 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 TSEN15Q8WW01 171 aaKnown RBP1.72□□□□□ -2.13
COPA-204ENST00000481522 NAT6Q93015 286 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 CPNE4Q96A23 557 aaPredicted RBP1.72□□□□□ -2.13
COPA-204ENST00000481522 RPEQ96AT9 228 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 ISOC1Q96CN7 298 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 SGTBQ96EQ0 304 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 KCNS1Q96KK3 526 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 ZFP3Q96NJ6 502 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 CALN1Q9BXU9 219 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 DHX35Q9H5Z1 703 aaKnown RBP1.72□□□□□ -2.13
COPA-204ENST00000481522 CCNB1IP1Q9NPC3 277 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 PTTG3PQ9NZH4 202 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 SIGLEC7Q9Y286 467 aa1.72□□□□□ -2.13
COPA-204ENST00000481522 RRP15Q9Y3B9 282 aaKnown RBP1.72□□□□□ -2.13
COPA-204ENST00000481522 TSPAN11A1L157 253 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 HLA-HP01893 362 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 RPN2P04844 631 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 SPTBP11277 2137 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 CTRB1P17538 263 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 NTF3P20783 257 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 PPICP45877 212 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 NAB1Q13506 487 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 TRMT5Q32P41 509 aaKnown RBP1.71□□□□□ -2.14
COPA-204ENST00000481522 DEGS2Q6QHC5 323 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 OPN5Q6U736 354 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 BZW1Q7L1Q6 419 aaKnown RBP1.71□□□□□ -2.14
COPA-204ENST00000481522 OR2Z1Q8NG97 314 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 OR10W1Q8NGF6 305 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 ENKURQ8TC29 256 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 GPR82Q96P67 336 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 TEAD3Q99594 435 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 GPR21Q99679 349 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 MARVELD1Q9BSK0 173 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 RDH14Q9HBH5 336 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 C20orf96Q9NUD7 363 aaPredicted RBP1.71□□□□□ -2.14
COPA-204ENST00000481522 ZNF391Q9UJN7 358 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 RCL1Q9Y2P8 373 aaKnown RBP1.71□□□□□ -2.14
COPA-204ENST00000481522 LRRC42Q9Y546 428 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 ANAPC1Q9H1A4 1944 aa1.71□□□□□ -2.14
COPA-204ENST00000481522 CCDC171Q6TFL3 1326 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 IGKV1-27A0A075B6S5 117 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 KCNE1BA0A087WTH5 132 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 OR6C70A6NIJ9 312 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 CENPBD1B2RD01 187 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 C10orf142B7Z368 130 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 ANKRD65E5RJM6 399 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 MFNGO00587 321 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 SLC16A7O60669 478 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 SCO1O75880 301 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 RAB5AP20339 215 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 COL8A2P25067 703 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 BMI1P35226 326 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 GGT2P36268 569 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 RFC3P40938 356 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 RAB9AP51151 201 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 ARPP19P56211 112 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 PRKCDQ05655 676 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 SPIN3Q5JUX0 258 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 TMEM220Q6QAJ8 160 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 FAM43BQ6ZT52 329 aaPredicted RBP1.7□□□□□ -2.14
COPA-204ENST00000481522 VKORC1L1Q8N0U8 176 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 CT55Q8WUE5 264 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 CDS1Q92903 461 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 TVP23CQ96ET8 276 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 OR4K3Q96R72 315 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 UQCC2Q9BRT2 126 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 SHANK2-AS3Q9BTD1 123 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 ANGPTL4Q9BY76 406 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 PIGUQ9H490 435 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 ZNF442Q9H7R0 627 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 RAB20Q9NX57 234 aa1.7□□□□□ -2.14
COPA-204ENST00000481522 CCDC88CQ9P219 2028 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms