RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 WNT4P56705 351 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 ST3GAL4Q11206 333 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 DOC2BQ14184 412 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 RCN1Q15293 331 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 TPTE2P1Q5T6R2 138 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 DMKNQ6E0U4 476 aaPredicted RBP9.2□□□□□ -0.94
CCM2-213ENST00000480658 TMEM219Q86XT9 240 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 DYNAPQ8N1N2 210 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 C8orf31Q8N9H6 132 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 OR10X1Q8NGY0 326 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 FAM110DQ8TAY7 271 aaPredicted RBP9.2□□□□□ -0.94
CCM2-213ENST00000480658 KIRREL1Q96J84 757 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 RBM14Q96PK6 669 aaKnown RBP9.2□□□□□ -0.94
CCM2-213ENST00000480658 NR1H4Q96RI1 486 aaPredicted RBP9.2□□□□□ -0.94
CCM2-213ENST00000480658 ZNF184Q99676 751 aaPredicted RBP9.2□□□□□ -0.94
CCM2-213ENST00000480658 UQCC2Q9BRT2 126 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 SLC25A33Q9BSK2 321 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 WNT10AQ9GZT5 417 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 CST11Q9H112 138 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 SERTAD4Q9NUC0 356 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 PLCXD1Q9NUJ7 323 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 AASSQ9UDR5 926 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 KIF25Q9UIL4 384 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 TRRAPQ9Y4A5 3859 aa9.2□□□□□ -0.94
CCM2-213ENST00000480658 TRAV24A0A0B4J272 114 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 TRBV5-5A0A0J9YX44 114 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 NPIPB11E5RHQ5 1161 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 J3QR06 171 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 HSPB6O14558 160 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 CASQ2O14958 399 aaPredicted RBP9.19□□□□□ -0.94
CCM2-213ENST00000480658 ORC5O43913 435 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 GLAP06280 429 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 UBBP0CG47 229 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 CALCBP10092 127 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 SERPINA2P20848 420 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 NFYBP25208 207 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 OR3A4PP47883 348 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 RAB13P51153 203 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 ADARB1P78563 741 aaKnown RBP9.19□□□□□ -0.94
CCM2-213ENST00000480658 SMN1Q16637 294 aaKnown RBP9.19□□□□□ -0.94
CCM2-213ENST00000480658 LRRC36Q1X8D7 754 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 C17orf58Q2M2W7 97 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 C6orf183Q5T699 404 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 OR2G6Q5TZ20 316 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 RSBN1Q5VWQ0 802 aaPredicted RBP9.19□□□□□ -0.94
CCM2-213ENST00000480658 CCBE1Q6UXH8 406 aaPredicted RBP9.19□□□□□ -0.94
CCM2-213ENST00000480658 ZNF554Q86TJ5 538 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 MS4A15Q8N5U1 240 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 SUMF2Q8NBJ7 301 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 NEK7Q8TDX7 302 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 RGP1Q92546 391 aaPredicted RBP9.19□□□□□ -0.94
CCM2-213ENST00000480658 MND1Q9BWT6 205 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 GON7Q9BXV9 100 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 GPR61Q9BZJ8 451 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 PPIL3Q9H2H8 161 aaKnown RBP9.19□□□□□ -0.94
CCM2-213ENST00000480658 ZNF286AQ9HBT8 521 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 ING4Q9UNL4 249 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 MOB4Q9Y3A3 225 aa9.19□□□□□ -0.94
CCM2-213ENST00000480658 MEX3AA1L020 520 aaKnown RBP9.18□□□□□ -0.94
CCM2-213ENST00000480658 MCRIP1C9JLW8 97 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 CCRL2O00421 344 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 SPINT2O43291 252 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 FGF16O43320 207 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 DUS4LO95620 317 aaKnown RBP9.18□□□□□ -0.94
CCM2-213ENST00000480658 IGFBP3P17936 291 aaPredicted RBP9.18□□□□□ -0.94
CCM2-213ENST00000480658 PIGYQ3MUY2 71 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 OGFRL1Q5TC84 451 aaPredicted RBP9.18□□□□□ -0.94
CCM2-213ENST00000480658 RNLSQ5VYX0 342 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 AWAT2Q6E213 333 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 CENPVQ7Z7K6 275 aaPredicted RBP9.18□□□□□ -0.94
CCM2-213ENST00000480658 JAGN1Q8N5M9 183 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 DSCAML1Q8TD84 2053 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 MYDGFQ969H8 173 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 PGLYRP3Q96LB9 341 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 VCX3BQ9H321 246 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 DCLRE1BQ9H816 532 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 SIGLEC9Q9Y336 463 aa9.18□□□□□ -0.94
CCM2-213ENST00000480658 LY6LH3BQJ8 138 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 AIPO00170 330 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 GEMIN2O14893 280 aaKnown RBP9.17□□□□□ -0.94
CCM2-213ENST00000480658 MMP23AO75900 390 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 CDRT1O95170 752 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 CGB3P0DN86 165 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 CGB7P0DN87 165 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 PF4V1P10720 104 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 PAX6P26367 422 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 SLC35B1P78383 322 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 ZNF816Q0VGE8 651 aaPredicted RBP9.17□□□□□ -0.94
CCM2-213ENST00000480658 SLC22A6Q4U2R8 563 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 LDLRAD2Q5SZI1 272 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 ATAD3CQ5T2N8 411 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 STEAP3Q658P3 488 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 COMMD1Q8N668 190 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 OR8H1Q8NGG4 311 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 OR13A1Q8NGR1 328 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 MRGPRDQ8TDS7 321 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 WIPF2Q8TF74 440 aaPredicted RBP9.17□□□□□ -0.94
CCM2-213ENST00000480658 R3HDM4Q96D70 268 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 ING3Q9NXR8 418 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 SCN3BQ9NY72 215 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms