RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 V9GY05 133 aa12.6□□□□□ -0.39
C9orf3-217ENST00000479161 A0A087WXM4 84 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 MEIOCA2RUB1 952 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 TRIM64CA6NLI5 447 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 VGLL3A8MV65 326 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 MCRIP1C9JLW8 97 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 NPIPB11E5RHQ5 1161 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 CRTAPO75718 401 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-217ENST00000479161 PSMB9P28065 219 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 RPS27AP62979 156 aaKnown RBP12.59□□□□□ -0.39
C9orf3-217ENST00000479161 KLRD1Q13241 179 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 ATXN7L3Q14CW9 347 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-217ENST00000479161 MINOS1Q5TGZ0 78 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 C16orf87Q6PH81 154 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 ZNF497Q6ZNH5 498 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 TRAPPC6BQ86SZ2 158 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 ZNF554Q86TJ5 538 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 OR5R1Q8NH85 324 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 MALSU1Q96EH3 234 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 GFI1Q99684 422 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 SELENOIQ9C0D9 397 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 ZNF696Q9H7X3 374 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 STUB1Q9UNE7 303 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 SOX21Q9Y651 276 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-217ENST00000479161 MINOS1-NBL1R4GNA1 71 aa12.59□□□□□ -0.39
C9orf3-217ENST00000479161 MEIKINA0A087WXM9 373 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 TMEM30CPA0ZSE6 113 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 POM121CA8CG34 1229 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 HOXA3O43365 443 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-217ENST00000479161 ORC5O43913 435 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 PDCD6O75340 191 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 LGALS4P56470 323 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 FAM189A2Q15884 450 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 C17orf58Q2M2W7 97 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 TMEM30BQ3MIR4 351 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 TPRA1Q86W33 373 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 PNKDQ8N490 385 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 FAM89BQ8N5H3 189 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 PLPPR1Q8TBJ4 325 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 DYRK2Q92630 601 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 CREB3L1Q96BA8 519 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 CLEC7AQ9BXN2 247 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 TMEM59Q9BXS4 323 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 RAB9BQ9NP90 201 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 KIF25Q9UIL4 384 aa12.58□□□□□ -0.4
C9orf3-217ENST00000479161 AK6Q9Y3D8 172 aaKnown RBP12.58□□□□□ -0.4
C9orf3-217ENST00000479161 IGHV2-26A0A0B4J1V2 119 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 MDFIC2A0A1B0GVS7 189 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 PAHP00439 452 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 IL1AP01583 271 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 MT-ND4P03905 459 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 HKR1P10072 659 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 ARSBP15848 533 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 MYL9P24844 172 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 CDK2P24941 298 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 DYNLT3P51808 116 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 DLX1P56177 255 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 Q3ZCU0 254 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 ATAD3CQ5T2N8 411 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 SIGIRRQ6IA17 410 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 RAB12Q6IQ22 244 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 TRAT1Q6PIZ9 186 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 GDPGP1Q6ZNW5 385 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 PDZD9Q8IXQ8 264 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-217ENST00000479161 TSPAN14Q8NG11 270 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 OR52M1Q8NGK5 317 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 ZNF596Q8TC21 504 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 URM1Q9BTM9 101 aaKnown RBP12.57□□□□□ -0.4
C9orf3-217ENST00000479161 BANF2Q9H503 90 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 PLGRKTQ9HBL7 147 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 VCX3AQ9NNX9 186 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 TXNL4BQ9NX01 149 aaKnown RBP12.57□□□□□ -0.4
C9orf3-217ENST00000479161 SSR3Q9UNL2 185 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 PEX16Q9Y5Y5 336 aa12.57□□□□□ -0.4
C9orf3-217ENST00000479161 IFITM5A6NNB3 132 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 LDLRAD4O15165 306 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 TMEM127O75204 238 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 MPIG6BO95866 241 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 IGLV1-47P01700 117 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 JUNBP17275 347 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-217ENST00000479161 SRSF2Q01130 221 aaKnown RBP12.56□□□□□ -0.4
C9orf3-217ENST00000479161 UNC119Q13432 240 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 RAB11BQ15907 218 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 ZNF782Q6ZMW2 699 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-217ENST00000479161 OR13A1Q8NGR1 328 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 PTX4Q96A99 478 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 CALYQ9NYX4 217 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 ZNF581Q9P0T4 197 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 STEAP1Q9UHE8 339 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 HSF4Q9ULV5 492 aa12.56□□□□□ -0.4
C9orf3-217ENST00000479161 BTBD17A6NE02 478 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 AIPO00170 330 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 HSPB6O14558 160 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 MMP23AO75900 390 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 ARG1P05089 322 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 RAB3BP20337 219 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 CHATP28329 748 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 FOXL1Q12952 345 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 TIMM50Q3ZCQ8 353 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms