RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 KIF25Q9UIL4 384 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 HSF4Q9ULV5 492 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 TMEM272A0A1B0GTI8 110 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 ZNF729A6NN14 1252 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-206ENST00000474828 AIREO43918 545 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 MT-ND4P03905 459 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 CD34P28906 385 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 CLDN12P56749 244 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 HILS1P60008 231 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 MIDNQ504T8 468 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 HES5Q5TA89 166 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 SLC16A12Q6ZSM3 486 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 BCL6BQ8N143 479 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-206ENST00000474828 URM1Q9BTM9 101 aaKnown RBP13.82□□□□□ -0.2
SCAF11-206ENST00000474828 SUCNR1Q9BXA5 334 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 HEXA-AS1Q9H8Q6 139 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 LIN7BQ9HAP6 207 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 RAB22AQ9UL26 194 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 PEX16Q9Y5Y5 336 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 ATRQ13535 2644 aa13.82□□□□□ -0.2
SCAF11-206ENST00000474828 LOC100506127A0A0U1RQW1 187 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 KBTBD11-OT1A0A1B0GTJ5 212 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 TMEM30CPA0ZSE6 113 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 POM121CA8CG34 1229 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 ODF3BA8MYP8 253 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 MCRIP1C9JLW8 97 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 CLPXO76031 633 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 TMEM50BP56557 158 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 ATAD3CQ5T2N8 411 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 SFXN4Q6P4A7 337 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 BRD3OSQ6XYD6 125 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 ZNF554Q86TJ5 538 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 ANKRD13BQ86YJ7 626 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 ZNF565Q8N9K5 539 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 OR10A7Q8NGE5 316 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 OR13A1Q8NGR1 328 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 SLC6A7Q99884 636 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 NICN1Q9BSH3 213 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 GAL3ST2Q9H3Q3 398 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 MBNL3Q9NUK0 354 aaKnown RBP13.81□□□□□ -0.2
SCAF11-206ENST00000474828 SESN1Q9Y6P5 492 aa13.81□□□□□ -0.2
SCAF11-206ENST00000474828 MEIKINA0A087WXM9 373 aa13.8□□□□□ -0.2
SCAF11-206ENST00000474828 HSPB6O14558 160 aa13.8□□□□□ -0.2
SCAF11-206ENST00000474828 GABARAPO95166 117 aa13.8□□□□□ -0.2
SCAF11-206ENST00000474828 GZMHP20718 246 aa13.8□□□□□ -0.2
SCAF11-206ENST00000474828 DLX1P56177 255 aa13.8□□□□□ -0.2
SCAF11-206ENST00000474828 PLA2G7Q13093 441 aa13.8□□□□□ -0.2
SCAF11-206ENST00000474828 FAM189A2Q15884 450 aa13.8□□□□□ -0.2
SCAF11-206ENST00000474828 BRICD5Q6PL45 260 aa13.8□□□□□ -0.2
SCAF11-206ENST00000474828 ZNF418Q8TF45 676 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-206ENST00000474828 SULT4A1Q9BR01 284 aa13.8□□□□□ -0.2
SCAF11-206ENST00000474828 MS4A7Q9GZW8 240 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-206ENST00000474828 SOX21Q9Y651 276 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-206ENST00000474828 IGHV3OR16-10A0A075B7F0 116 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 TRBV6-6A0A0A6YYG2 114 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 C15orf65H3BRN8 121 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 CLDN34H7C241 214 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 NPFFO15130 113 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 TCF21O43680 179 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 ORC5O43913 435 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 MMP23AO75900 390 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 NAPSAO96009 420 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 IL1AP01583 271 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 CLEC2LP0C7M8 214 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 SLC2A2P11168 524 aaPredicted RBP13.79□□□□□ -0.2
SCAF11-206ENST00000474828 KLRD1Q13241 179 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 CTF1Q16619 201 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 RUSC1-AS1Q66K80 236 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 ZNF626Q68DY1 528 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 OR52W1Q6IF63 320 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 LDLRAD3Q86YD5 345 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 CROCCP3Q8IVE0 287 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 ZFAND2BQ8WV99 257 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 DYRK2Q92630 601 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 CYYR1Q96J86 154 aa13.79□□□□□ -0.2
SCAF11-206ENST00000474828 DNHD1Q96M86 4753 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 RAB27BO00194 218 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 SOCS1O15524 211 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 IGLV1-47P01700 117 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 BLVRBP30043 206 aaPredicted RBP13.78□□□□□ -0.2
SCAF11-206ENST00000474828 RPS19P39019 145 aaKnown RBP13.78□□□□□ -0.2
SCAF11-206ENST00000474828 GDNFP39905 211 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 EFNB2P52799 333 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 DEFB112Q30KQ8 113 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 ZNF880Q6PDB4 577 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 ZDHHC22Q8N966 263 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 OR56B1Q8NGI3 324 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 OR52M1Q8NGK5 317 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 OR13D1Q8NGV5 346 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 MRPL30Q8TCC3 161 aaKnown RBP13.78□□□□□ -0.2
SCAF11-206ENST00000474828 C22orf15Q8WYQ4 148 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 KIRREL1Q96J84 757 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 NEDD4LQ96PU5 975 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 TMEM133Q9H2Q1 129 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 ESM1Q9NQ30 184 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 ETAA1Q9NY74 926 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 CALYQ9NYX4 217 aa13.78□□□□□ -0.2
SCAF11-206ENST00000474828 A0A0U1RQK1 487 aa13.77□□□□□ -0.21
SCAF11-206ENST00000474828 MEX3AA1L020 520 aaKnown RBP13.77□□□□□ -0.21
SCAF11-206ENST00000474828 F2RL2O00254 374 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms