RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 PTPN13Q12923 2485 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 CLUHO75153 1309 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 PTPRBP23467 1997 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 MYO16Q9Y6X6 1858 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 GCN1Q92616 2671 aaKnown RBP1.88□□□□□ -2.11
XRN1-210ENST00000472697 NID2Q14112 1375 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 LOC102724200A0A096LPH7 203 aaPredicted RBP1.88□□□□□ -2.11
XRN1-210ENST00000472697 H7C423 109 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 HPGDSO60760 199 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 CCDC22O60826 627 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 GCM2O75603 506 aaPredicted RBP1.88□□□□□ -2.11
XRN1-210ENST00000472697 ZNF189O75820 626 aaPredicted RBP1.88□□□□□ -2.11
XRN1-210ENST00000472697 ZNF688P0C7X2 276 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 GATA2P23769 480 aaPredicted RBP1.88□□□□□ -2.11
XRN1-210ENST00000472697 CDK9P50750 372 aaKnown RBP1.88□□□□□ -2.11
XRN1-210ENST00000472697 ZNF136P52737 540 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 OR12D2P58182 307 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 DEFA3P59666 94 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 CDK5Q00535 292 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 C2orf54Q08AI8 447 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 NSDHLQ15738 373 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 IMPG1Q17R60 797 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 CDNFQ49AH0 187 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 RBM48Q5RL73 367 aaKnown RBP1.88□□□□□ -2.11
XRN1-210ENST00000472697 GDPD3Q7L5L3 318 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 DOLPP1Q86YN1 238 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 PACRGLQ8N7B6 248 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 SPPL2BQ8TCT7 592 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 ACTRT1Q8TDG2 376 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 FAM222BQ8WU58 562 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 DNASE2BQ8WZ79 361 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 TESCQ96BS2 214 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 CHAC1Q9BUX1 264 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 C19orf24Q9BVV8 132 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 ARL6Q9H0F7 186 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 ASB7Q9H672 318 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 INIPQ9NRY2 104 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.88□□□□□ -2.11
XRN1-210ENST00000472697 KCNE3Q9Y6H6 103 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 MYO18BQ8IUG5 2567 aa1.88□□□□□ -2.11
XRN1-210ENST00000472697 TMEM238C9JI98 176 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 M0QZ92 97 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 ZNF593O00488 134 aaPredicted RBP1.87□□□□□ -2.11
XRN1-210ENST00000472697 NDUFS5O43920 106 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 ENTPD6O75354 484 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 GLSO94925 669 aaPredicted RBP1.87□□□□□ -2.11
XRN1-210ENST00000472697 PSMA1P25786 263 aaKnown RBP1.87□□□□□ -2.11
XRN1-210ENST00000472697 ERFP50548 548 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 DLX6P56179 175 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 AP3S2P59780 193 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 RUNX1Q01196 453 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 BAXQ07812 192 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 AESQ08117 197 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 SLC9A3R2Q15599 337 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 PRR30Q53SZ7 412 aaPredicted RBP1.87□□□□□ -2.11
XRN1-210ENST00000472697 SLC25A30Q5SVS4 291 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 HES5Q5TA89 166 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 TSPO2Q5TGU0 170 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 HACD4Q5VWC8 232 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 C2orf66Q6UXQ4 117 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 SSX7Q7RTT5 188 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 C11orf42Q8N5U0 333 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 RHOXF1Q8NHV9 184 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 RNF133Q8WVZ7 376 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 S100PBPQ96BU1 408 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 TMED9Q9BVK6 235 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 DSN1Q9H410 356 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 CLEC4EQ9ULY5 219 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 PSG11Q9UQ72 335 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 AP3M1Q9Y2T2 418 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 MOB4Q9Y3A3 225 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 MN1Q10571 1320 aaPredicted RBP1.87□□□□□ -2.11
XRN1-210ENST00000472697 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
XRN1-210ENST00000472697 PLXNB3Q9ULL4 1909 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 GJE1A6NN92 205 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 OR2AT4A6NND4 320 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 LRRN3E7EW58 273 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 K7EQS6 105 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 TLX1NBP0CAT3 122 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 ZNF708P17019 499 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 ZNF17P17021 662 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 RCC1P18754 421 aaPredicted RBP1.87□□□□□ -2.11
XRN1-210ENST00000472697 NOVP48745 357 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 GFERP55789 205 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 RAB25P57735 213 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 PFN3P60673 137 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 VBP1P61758 197 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 MS4A2Q01362 244 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 ZNF45Q02386 682 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 GLO1Q04760 184 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 CKAP4Q07065 602 aaKnown RBP1.87□□□□□ -2.11
XRN1-210ENST00000472697 PNOCQ13519 176 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 HTR4Q13639 388 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 ARFRP1Q13795 201 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 RSU1Q15404 277 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 ACSM3Q53FZ2 586 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 TTC32Q5I0X7 151 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 KCTD16Q68DU8 428 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 GSG1LQ6UXU4 331 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 FAM231DQ6ZW35 169 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms